Factsheet for AT4G24280.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08914	Canola	cytosol	82.31	95.17
CDY24832	Canola	cytosol	82.59	94.88
CDY34275	Canola	cytosol	82.45	94.72
CDY11007	Canola	cytosol	81.89	94.53
Bra013786.1-P	Field mustard	plastid	93.18	94.09
Bra002461.1-P	Field mustard	cytosol	69.5	93.97
Bra010498.1-P	Field mustard	plastid	93.73	93.86
CDY03462	Canola	plastid	93.04	93.82
CDX92631	Canola	plastid	91.92	93.22
Bra019231.1-P	Field mustard	plastid	92.06	93.1
AT5G49910.1	Thale cress	plastid	91.23	91.23
VIT_17s0000g03310.t01	Wine grape	extracellular, plastid	86.07	87.41
Os05t0303000-01	Rice	plastid	55.71	87.15
KRH06058	Soybean	mitochondrion	82.73	86.21
KRH26303	Soybean	cytosol, endoplasmic reticulum	32.03	86.14
GSMUA_Achr6P28370_001	Banana	plastid	76.88	85.98
KXG37805	Sorghum	plastid	81.48	85.78
PGSC0003DMT400064031	Potato	cytosol, plastid	84.26	85.69
GSMUA_Achr9P07750_001	Banana	plastid	76.74	85.69
KRH26302	Soybean	plastid	32.87	85.51
Zm00001d013507_P001	Maize	plastid	81.34	85.51
Zm00001d033591_P001	Maize	plastid	81.34	85.51
TraesCS1D01G131800.1	Wheat	plastid	80.92	85.19
TraesCS1A01G133100.2	Wheat	golgi	80.78	84.8
TraesCS1B01G151300.1	Wheat	plastid	80.78	84.55
VIT_18s0041g01230.t01	Wine grape	plastid	81.2	84.49
CDY03461	Canola	plastid	82.31	83.12
Solyc11g020040.1.1	Tomato	plastid	78.97	81.94
EES15917	Sorghum	plastid	79.39	81.2
TraesCS5D01G117600.1	Wheat	plastid	77.99	81.16
TraesCS5B01G111200.1	Wheat	golgi, plastid	77.86	81.01
TraesCS5A01G106200.2	Wheat	plastid	77.72	80.87
Zm00001d023802_P001	Maize	plastid	78.97	80.65
Os12t0244100-01	Rice	plastid	78.27	80.52
HORVU5Hr1G032650.1	Barley	plastid	77.3	80.2
Zm00001d041119_P001	Maize	plastid	78.27	79.94
CDY03459	Canola	cytosol	69.78	75.68
HORVU1Hr1G030790.1	Barley	plastid	81.06	74.62
AT5G09590.1	Thale cress	mitochondrion	50.0	52.64
AT4G37910.1	Thale cress	mitochondrion	49.16	51.76
AT1G56410.1	Thale cress	cytosol	40.81	47.49
AT5G02490.1	Thale cress	cytosol	42.76	47.01
AT3G09440.2	Thale cress	cytosol	42.48	47.0
AT3G12580.1	Thale cress	cytosol	42.34	46.77
AT5G28540.1	Thale cress	endoplasmic reticulum	43.45	46.64
AT5G02500.1	Thale cress	cytosol	42.2	46.54
AT1G16030.1	Thale cress	cytosol	41.64	46.28
AT5G42020.3	Thale cress	endoplasmic reticulum	42.9	45.77
AT1G09080.1	Thale cress	endoplasmic reticulum	42.48	45.19
GSMUA_Achr6P12370_001	Banana	plastid	77.16	42.39

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EntrezGene:828531
UniProt:A0A178V345	ProteinID:AEE84884.1	ArrayExpress:AT4G24280	EnsemblPlantsGene:AT4G24280	RefSeq:AT4G24280	TAIR:AT4G24280
RefSeq:AT4G24280-TAIR-G	EnsemblPlants:AT4G24280.1	TAIR:AT4G24280.1	EMBL:AY072138	EMBL:BT001950	ProteinID:CAB45063.1
ProteinID:CAB79338.1	InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005739	GO:GO:0006457	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150
GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009628
GO:GO:0009941	GO:GO:0009987	GO:GO:0015031	GO:GO:0016032	GO:GO:0045036	GO:GO:0046686
GO:GO:0051082	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	HAMAP:MF_00332	RefSeq:NP_194159.1	ProteinID:OAP00058.1	PFAM:PF00012	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0006339	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329
ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332	UniProt:Q9STW6	SUPFAM:SSF100920	SUPFAM:SSF100934
SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI000000BD60	Symbol:cpHsc70-1	SEG:seg	:

Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]

Coordinates

chr4:+:12589810..12593800

Molecular Weight (calculated)

76512.3 Da

IEP (calculated)

4.807

GRAVY (calculated)

-0.321

Length

718 amino acids

Sequence
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.