CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023802_P001	Maize	plastid	98.72	98.58
Zm00001d041119_P001	Maize	plastid	98.15	98.01
TraesCS5A01G106200.2	Wheat	plastid	88.32	89.86
TraesCS5D01G117600.1	Wheat	plastid	88.32	89.86
TraesCS5B01G111200.1	Wheat	golgi, plastid	88.18	89.71
HORVU5Hr1G032650.1	Barley	plastid	87.46	88.73
Os12t0244100-01	Rice	plastid	87.89	88.4
CDY08914	Canola	cytosol	77.49	87.6
CDY24832	Canola	cytosol	77.78	87.36
CDY11007	Canola	cytosol	77.07	86.98
CDY34275	Canola	cytosol	76.78	86.24
Bra002461.1-P	Field mustard	cytosol	65.1	86.06
KXG37805	Sorghum	plastid	82.48	84.9
CDX92631	Canola	plastid	81.62	80.93
Bra010498.1-P	Field mustard	plastid	82.48	80.75
Bra019231.1-P	Field mustard	plastid	81.48	80.56
Bra013786.1-P	Field mustard	plastid	81.48	80.45
CDY03462	Canola	plastid	81.48	80.34
AT5G49910.1	Thale cress	plastid	81.2	79.39
AT4G24280.1	Thale cress	plastid	81.2	79.39
CDY03461	Canola	plastid	74.93	73.98
CDY03459	Canola	cytosol	61.68	65.41
EER91365	Sorghum	mitochondrion	50.57	52.36
EER99104	Sorghum	mitochondrion	49.57	51.33
EES01731	Sorghum	cytosol	43.59	47.22
KXG26133	Sorghum	cytosol	41.17	46.92
EES16191	Sorghum	cytosol	43.02	46.53
EES19649	Sorghum	cytosol	42.88	46.38
EER95095	Sorghum	cytosol	42.73	46.23
EER92466	Sorghum	cytosol	42.88	46.17
KXG29291	Sorghum	plasma membrane	43.87	45.43
EES01866	Sorghum	endoplasmic reticulum	43.02	45.28
OQU92816	Sorghum	cytosol	27.78	44.93
KXG39675	Sorghum	cytosol	34.19	44.69
KXG39677	Sorghum	cytosol	34.76	44.36
EER95091	Sorghum	cytosol	35.61	44.17
KXG39678	Sorghum	cytosol	34.9	44.06
EER95094	Sorghum	cytosol	34.76	43.73
EER93587	Sorghum	endoplasmic reticulum	41.74	43.34
EER92471	Sorghum	cytosol	34.9	42.83
EER95090	Sorghum	cytosol	34.76	42.73
OQU92815	Sorghum	cytosol	23.08	42.52

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EntrezGene:8061221
UniProt:C5YU58	InterPro:Chaperone_DnaK	ncoils:Coil	EnsemblPlants:EES15917	ProteinID:EES15917	ProteinID:EES15917.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS
InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF211	EnsemblPlantsGene:SORBI_3008G088200
SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	unigene:Sbi.421	TIGRFAMs:TIGR02350	UniParc:UPI0001A881D8
RefSeq:XP_002442079.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:18774401..18779411

Molecular Weight (calculated)

74464.3 Da

IEP (calculated)

4.860

GRAVY (calculated)

-0.257

Length

702 amino acids

Sequence
(BLAST)

001: MASFTCSQVG ATAAGGASPF LGYRRRSGAT PSSSLFVGRR LAASVRMRAP SRGAARGGSA LRVTCEKVVG IDLGTTNSAV AAMEGGKPTV VTNAEGARTT
101: PSVVAYTKTG ERLVGQIAKR QAVVNPENTF FSVKRFIGRK MSEVDDEAKQ VSYGVVKDEN GNVKLDCPAI GKQFAAEEIS AQVLRKLVDD ASKFLNEKIT
201: KAVVTVPAYF NDSQRTATKD AGRIAGLEVL RIINEPTAAS LAYGFEKKNN ETILVFDLGG GTFDVSVLEV GDGVFEVLST SGDTHLGGDD FDKRIVDWLA
301: SNFKKDEGID LLKDKQALQR LTEAAEKAKM ELSTLTQANI SLPFITATAD GPKHIEATLS RAKFEELCSD LIDRLKTPVN NALRDAKLSV SDLDEVILVG
401: GSTRIPAVQE LVRKLTDKDP NVTVNPDEVV SLGAAVQGGV LAGDVKDVVL LDVTPLSLGL ETLGGVMTKI IPRNTTLPTS KSEVFSTAAD GQTSVEINVL
501: QGEREFVRDN KSLGSFRLDG IPPAPRGVPQ IEVKFDIDAN GILSVAAIDK GTGKKQDITI TGASTLPKDE VERMVEEADK FAKEDKEKRD AIDTKNQADS
601: VVYQTEKQLK ELGDKVPAPV KEKVDVKLQE LKDAISGGST QSMKDAMAAL NQEVMQIGQA MYNQPGASAA GPTPGAEAGP TPGTGPAQND GDVIDADFTD
701: SN

Best Arabidopsis Sequence Match ( AT5G49910.1 )
(BLAST)

001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN

Arabidopsis Description

HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.