CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24832	Canola	cytosol	98.55	97.92
CDY11007	Canola	cytosol	96.94	96.78
CDY34275	Canola	cytosol	96.78	96.16
Os05t0303000-01	Rice	plastid	63.28	85.62
CDX92631	Canola	plastid	96.94	85.03
KRH26303	Soybean	cytosol, endoplasmic reticulum	36.55	85.02
CDY03462	Canola	plastid	96.14	83.85
AT4G24280.1	Thale cress	plastid	95.17	82.31
KRH06058	Soybean	mitochondrion	89.21	80.41
KXG37805	Sorghum	plastid	87.76	79.91
Zm00001d033591_P001	Maize	plastid	87.76	79.8
Zm00001d013507_P001	Maize	plastid	87.6	79.65
VIT_17s0000g03310.t01	Wine grape	extracellular, plastid	90.02	79.07
TraesCS1D01G131800.1	Wheat	plastid	86.8	79.03
GSMUA_Achr9P07750_001	Banana	plastid	81.48	78.69
TraesCS1A01G133100.2	Wheat	golgi	86.63	78.66
PGSC0003DMT400064031	Potato	cytosol, plastid	89.21	78.47
GSMUA_Achr6P28370_001	Banana	plastid	81.0	78.35
TraesCS1B01G151300.1	Wheat	plastid	86.47	78.28
VIT_18s0041g01230.t01	Wine grape	plastid	86.96	78.26
EES15917	Sorghum	plastid	87.6	77.49
TraesCS5D01G117600.1	Wheat	plastid	85.99	77.39
TraesCS5B01G111200.1	Wheat	golgi, plastid	85.83	77.25
TraesCS5A01G106200.2	Wheat	plastid	85.83	77.25
Zm00001d023802_P001	Maize	plastid	87.44	77.24
HORVU5Hr1G032650.1	Barley	plastid	85.51	76.73
Zm00001d041119_P001	Maize	plastid	86.8	76.67
Solyc11g020040.1.1	Tomato	plastid	85.19	76.45
Os12t0244100-01	Rice	plastid	85.83	76.36
CDY03461	Canola	plastid	85.35	74.54
KRH26302	Soybean	plastid	31.72	71.38
HORVU1Hr1G030790.1	Barley	plastid	86.63	68.97
CDY03459	Canola	cytosol	71.98	67.52
CDY56552	Canola	mitochondrion	54.91	50.07
CDX81132	Canola	mitochondrion	54.91	50.07
CDX85810	Canola	mitochondrion	54.59	49.85
CDX90397	Canola	mitochondrion	53.95	49.41
CDY49682	Canola	mitochondrion	53.95	49.19
CDX75683	Canola	mitochondrion	52.98	48.24
CDX69342	Canola	mitochondrion	52.82	48.24
CDY33359	Canola	cytosol	39.45	47.3
CDY35063	Canola	cytosol	39.45	47.3
CDY22648	Canola	cytosol	43.96	45.12
CDY52661	Canola	cytosol	46.86	44.98
CDY50531	Canola	cytosol	46.86	44.77
CDY00784	Canola	cytosol	46.54	44.46
CDX67525	Canola	endoplasmic reticulum	41.22	44.37
CDX73815	Canola	cytosol	46.54	44.33
CDX96825	Canola	cytosol	45.89	43.85
CDX83960	Canola	cytosol	45.89	43.85
CDY63497	Canola	endoplasmic reticulum	45.25	43.77
CDY23972	Canola	endoplasmic reticulum	45.25	43.77
CDX84809	Canola	endoplasmic reticulum	45.25	43.77
CDX79726	Canola	endoplasmic reticulum	45.25	43.77
CDX77423	Canola	cytosol, endoplasmic reticulum	45.25	43.77
CDY46766	Canola	endoplasmic reticulum	45.09	43.61
CDY13371	Canola	cytosol, endoplasmic reticulum	46.86	43.24
CDY40362	Canola	cytosol, mitochondrion	31.56	43.17
CDY44807	Canola	mitochondrion	54.11	42.53
CDY06347	Canola	endoplasmic reticulum	43.64	42.21
CDY49668	Canola	cytosol	32.05	39.96
GSMUA_Achr6P12370_001	Banana	plastid	81.64	38.79
CDY49667	Canola	nucleus	1.61	13.33

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:A0A078F7A7
UniProt:A0A078F7A7	EnsemblPlants:CDY08914	ProteinID:CDY08914	ProteinID:CDY08914.1	InterPro:Chaperone_DnaK	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00000934001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI0004EEEE13	SEG:seg	:

Description

BnaC08g11440DBnaC08g11440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7A7]

Coordinates

chrLK031990:+:473738..476725

Molecular Weight (calculated)

66744.7 Da

IEP (calculated)

4.584

GRAVY (calculated)

-0.381

Length

621 amino acids

Sequence
(BLAST)

001: MEGGKPTIVT NAEGQRTTPS VVAYTKSGDR LVGQIAKRQA VVNPENTFFS VKRFIGRRMN EVDEEAKQVS YRVVKDENGN VKLECPAIRK QFAAEEISAQ
101: VLRKLVDDAS RFLNEKVTKA VVTVPAYFND SQRTATKDAG RIAGLEVLRI INEPTAASLA YGFERKSNET ILVFDLGGGT FDVSVLEVGD GVFEVLSTSG
201: DTHLGGDDFD KRVVDSLASN FKKDEGIDLL KDKQALQRLT EAAEKAKIEL SSLTQTNMSL PFITATADGP KHIETTLTRA KFEELCSDLL DRCKTPVENS
301: LRDAKLSFKD IDEVILVGGS TRIPAVQEVV RKLTGKEPNV TVNPDEVVAL GAAVQAGVLA GDVSDIVLLD VTPLSIGLET LGGVMTKIIP RNSTLPTSKS
401: EVFSTAADGQ TSVEINVLQG EREFVRDNKS LGSFRLDGIP PAPRGVPQIE VKFDIDANGI LSVSASDKGT GKKQDITITG ASTLPKDEVE QMVQEAERFA
501: KDDKEKRDAI DTKNQADSVV YQTEKQLKEL GEKIPGEVKE KVEAKLQELK DKIGSGSTQE IKDTMAALNQ EVMQIGQSMY NQPGAGAGAG SSTGGEGDSS
601: ADSSSSKGGD DVIDADFTDS N

Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Arabidopsis Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.