CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

cytosol: 16847873

msms PMID: 16847873 doi

V Katavic, GK Agrawal, M Hajduch, SL Harris, JJ Thelen

University of Missouri-Columbia, Department of Biochemistry, Columbia 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63497	Canola	endoplasmic reticulum	99.38	99.38
CDX79726	Canola	endoplasmic reticulum	97.98	97.98
CDY23972	Canola	endoplasmic reticulum	97.82	97.82
CDX84809	Canola	endoplasmic reticulum	97.82	97.82
CDY46766	Canola	endoplasmic reticulum	97.66	97.66
CDX67525	Canola	endoplasmic reticulum	87.23	97.05
Bra015047.1-P	Field mustard	endoplasmic reticulum	97.04	93.54
AT5G28540.1	Thale cress	endoplasmic reticulum	96.73	92.83
CDY13371	Canola	cytosol, endoplasmic reticulum	96.11	91.68
AT5G42020.3	Thale cress	endoplasmic reticulum	95.17	90.79
KRH41370	Soybean	endoplasmic reticulum	91.28	87.86
KRH60086	Soybean	endoplasmic reticulum	91.28	87.72
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	90.03	86.66
PGSC0003DMT400047710	Potato	endoplasmic reticulum	89.88	86.38
PGSC0003DMT400031937	Potato	extracellular	89.41	86.06
Os02t0115900-02	Rice	plasma membrane	88.78	85.71
TraesCS6D01G049100.1	Wheat	golgi	88.01	84.96
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	88.01	84.96
TraesCS6A01G042600.1	Wheat	golgi	88.01	84.96
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	88.16	84.86
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	80.53	84.75
Zm00001d014993_P001	Maize	endoplasmic reticulum	87.38	84.62
Zm00001d054043_P007	Maize	endoplasmic reticulum	87.23	84.46
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	78.5	83.86
KRH60091	Soybean	nucleus	90.5	82.88
Solyc06g052050.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	79.91	82.88
KRH41372	Soybean	endoplasmic reticulum	89.88	81.5
KXG29291	Sorghum	plasma membrane	85.05	80.53
GSMUA_Achr4P11940_001	Banana	cytosol	87.85	78.12
CDY22648	Canola	cytosol	73.36	77.85
CDY06347	Canola	endoplasmic reticulum	72.9	72.9
CDY00784	Canola	cytosol	61.37	60.62
CDX73815	Canola	cytosol	61.53	60.58
CDY50531	Canola	cytosol	60.9	60.15
CDY52661	Canola	cytosol	60.59	60.12
CDY33359	Canola	cytosol	48.13	59.65
CDY35063	Canola	cytosol	47.82	59.27
CDX83960	Canola	cytosol	59.03	58.31
CDX96825	Canola	cytosol	59.03	58.31
GSMUA_Achr5P10770_001	Banana	cytosol	66.98	58.27
CDY49668	Canola	cytosol	40.97	52.81
CDY40362	Canola	cytosol, mitochondrion	36.29	51.32
CDY56552	Canola	mitochondrion	48.29	45.52
CDX81132	Canola	mitochondrion	48.29	45.52
CDY11007	Canola	cytosol	44.08	45.5
CDX85810	Canola	mitochondrion	48.13	45.44
CDY34275	Canola	cytosol	44.08	45.28
CDY24832	Canola	cytosol	44.08	45.28
CDY08914	Canola	cytosol	43.77	45.25
CDX90397	Canola	mitochondrion	47.51	44.99
CDX75683	Canola	mitochondrion	47.51	44.72
CDX69342	Canola	mitochondrion	47.35	44.71
CDY49682	Canola	mitochondrion	47.35	44.64
CDX92631	Canola	plastid	46.11	41.81
CDY03462	Canola	plastid	45.95	41.43
CDY03461	Canola	plastid	43.77	39.52
CDY44807	Canola	mitochondrion	47.04	38.23
CDY03459	Canola	cytosol	39.25	38.07
CDY49667	Canola	nucleus	2.49	21.33

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	GO:A0A078CQL5
EnsemblPlants:CDX77423	ProteinID:CDX77423	ProteinID:CDX77423.1	ncoils:Coil	EnsemblPlantsGene:GSBRNA2T00128268001	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PFscan:PS51257	PANTHER:PTHR19375
PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EDD067	SEG:seg	:	:	:	:

Description

BnaA07g05610D

Coordinates

chrLK031811:-:451197..453922

Molecular Weight (calculated)

70780.0 Da

IEP (calculated)

4.784

GRAVY (calculated)

-0.448

Length

642 amino acids

Sequence
(BLAST)

001: MARSFGANGT VVLAIIFFGC LFTFSTAKEE ATKLGTVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVAFTDSER LIGEAAKNQA PLNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE VSAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIMD YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GLDFSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGIPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASEEFA EEDKKVKERI DARNSLETYV YNMKNQVSDK DKLADKLEAD EKEKIEAATK EALEWLDENQ NSEKEEYDEK
601: LKEVEAVCNP IITAVYQRTG GAPGAGGESA TEEEEDESHD EL

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.