Factsheet for PGSC0003DMT400047710

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
endoplasmic reticulum 9
extracellular 4
vacuole 4
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g082920.2.1	Tomato	nucleus, plastid	96.41	96.55
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	92.22	92.35
PGSC0003DMT400031937	Potato	extracellular	92.07	92.2
KRH60086	Soybean	endoplasmic reticulum	92.07	92.07
KRH41370	Soybean	endoplasmic reticulum	91.92	92.05
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	90.72	90.85
CDY63497	Canola	endoplasmic reticulum	86.83	90.34
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	82.48	90.33
CDY46766	Canola	endoplasmic reticulum	86.68	90.19
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	81.14	90.18
Bra028521.1-P	Field mustard	endoplasmic reticulum	89.67	90.08
CDX84809	Canola	endoplasmic reticulum	86.53	90.03
CDX79726	Canola	endoplasmic reticulum	86.53	90.03
CDY23972	Canola	endoplasmic reticulum	86.53	90.03
Bra022819.1-P	Field mustard	endoplasmic reticulum	90.12	89.99
CDX67525	Canola	endoplasmic reticulum	77.69	89.95
CDX77423	Canola	cytosol, endoplasmic reticulum	86.38	89.88
AT5G28540.1	Thale cress	endoplasmic reticulum	89.82	89.69
Bra015047.1-P	Field mustard	endoplasmic reticulum	89.37	89.64
TraesCS6D01G049100.1	Wheat	golgi	89.22	89.62
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	89.22	89.62
TraesCS6A01G042600.1	Wheat	golgi	89.22	89.62
Zm00001d014993_P001	Maize	endoplasmic reticulum	88.77	89.44
Zm00001d054043_P007	Maize	endoplasmic reticulum	88.62	89.29
Os02t0115900-02	Rice	plasma membrane	88.62	89.02
AT5G42020.3	Thale cress	endoplasmic reticulum	89.37	88.71
CDY13371	Canola	cytosol, endoplasmic reticulum	89.37	88.71
Bra023110.1-P	Field mustard	endoplasmic reticulum	85.03	88.47
KRH60091	Soybean	nucleus	91.62	87.3
KRH41372	Soybean	endoplasmic reticulum	91.02	85.88
KXG29291	Sorghum	plasma membrane	85.78	84.51
GSMUA_Achr4P11940_001	Banana	cytosol	88.77	82.13
PGSC0003DMT400063543	Potato	endoplasmic reticulum	75.3	75.19
PGSC0003DMT400073713	Potato	cytosol	61.83	64.63
PGSC0003DMT400049441	Potato	cytosol	62.13	64.14
PGSC0003DMT400078163	Potato	cytosol	62.13	64.04
PGSC0003DMT400071337	Potato	cytosol	61.98	63.79
PGSC0003DMT400001058	Potato	cytosol	61.83	63.64
PGSC0003DMT400001182	Potato	cytosol	61.98	63.5
PGSC0003DMT400023039	Potato	cytosol, extracellular	61.53	63.33
PGSC0003DMT400022442	Potato	cytosol	45.96	63.17
PGSC0003DMT400036856	Potato	cytosol	61.53	62.84
PGSC0003DMT400029104	Potato	cytosol	57.63	62.7
GSMUA_Achr5P10770_001	Banana	cytosol	67.81	61.38
PGSC0003DMT400027703	Potato	mitochondrion	48.65	48.01
PGSC0003DMT400008101	Potato	mitochondrion	48.35	47.92
PGSC0003DMT400064031	Potato	cytosol, plastid	46.56	44.05

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:102594892	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	UniProt:M1BLB0
PFAM:PF00012	EnsemblPlantsGene:PGSC0003DMG400018544	PGSC:PGSC0003DMG400018544	EnsemblPlants:PGSC0003DMT400047710	PRINTS:PR00301	ScanProsite:PS00297
ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934
SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029600E7	RefSeq:XP_006350519.1	SEG:seg

Description

Luminal-binding protein 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400018544]

Coordinates

chr3:-:48111896..48115980

Molecular Weight (calculated)

73614.6 Da

IEP (calculated)

4.837

GRAVY (calculated)

-0.427

Length

668 amino acids

Sequence
(BLAST)

001: MATALKRRAS SIVFAIVLLG SLFAFSIAKE EATKLGTVIG IDLGTTYSCV GVYKNGHVEI IANDQGNRIT PSWVAFTDGE RLIGEAAKNQ AAVNPERTVF
101: DVKRLIGRKF EDKEVQRDMK LVPYKIVNRD GKPYIQVKIK DGETKVFSPE EVSAMILIKM KETAEAFLGK TIKDAVVTVP AYFNDAQRQA TKDAGVIAGL
201: NVARIINEPT AAAIAYGLDK KGGEKNILVF DLGGGTFDVS ILTIDNGVFE VLATNGDTHL GGEDFDQRIM EYFIKLIKKK HGKDISKDNK ALGKLRREAE
301: RAKRALSSQH QVRVEIESLF DGVDFSEPLT RARFEELNND LFRKTMTPVK KAMEDAGLAK NQIDEIVLVG GSTRIPKVQQ LLKDYFDGKE PSKGVNPDEA
401: VAFGAAVQGG ILSGEGGDET KDILLLDVAP LTLGIETVGG VMTKLIPRNT VIPTKKSQVF TTYQDQQTTV TISVFEGERS MVKDCRLLGK FDLTGIPPAP
501: RGTPQIEVTF EVDANGILNV KAEDKASGKS EKITITNDKG RLSQEEIERM VKEAEEFAEE DKKVKERVDA RNSLETYVYN MRNQINDKDK LADKLESDEK
601: EKIETATKEA LEWLDDNQNA EKEDYEEKLK EVEAVCNPII TAVYQRSGGA PGGASEDSNE DDDSHDEL

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.