Factsheet for Os02t0115900-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 10
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

plasma membrane: 18260611
nucleus: 19621931
extracellular: 24083427
nucleus: 26035336
plastid: 27992503
plasma membrane: 28056797

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d054043_P007	Maize	endoplasmic reticulum	96.69	96.98
Zm00001d014993_P001	Maize	endoplasmic reticulum	96.69	96.98
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	95.79	95.79
TraesCS6D01G049100.1	Wheat	golgi	95.79	95.79
TraesCS6A01G042600.1	Wheat	golgi	95.64	95.64
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	83.46	92.35
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	84.36	91.97
KRH41370	Soybean	endoplasmic reticulum	91.58	91.3
KXG29291	Sorghum	plasma membrane	93.08	91.3
KRH60086	Soybean	endoplasmic reticulum	91.58	91.17
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	90.38	90.1
Solyc08g082820.2.1	Tomato	extracellular	89.62	89.49
CDX67525	Canola	endoplasmic reticulum	77.44	89.25
Bra028521.1-P	Field mustard	endoplasmic reticulum	89.02	89.02
CDY63497	Canola	endoplasmic reticulum	85.86	88.94
PGSC0003DMT400031937	Potato	extracellular	89.17	88.91
CDX77423	Canola	cytosol, endoplasmic reticulum	85.71	88.78
PGSC0003DMT400047710	Potato	endoplasmic reticulum	89.02	88.62
Bra015047.1-P	Field mustard	endoplasmic reticulum	88.72	88.59
Bra022819.1-P	Field mustard	endoplasmic reticulum	88.87	88.34
AT5G28540.1	Thale cress	endoplasmic reticulum	88.87	88.34
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	88.57	88.31
Solyc03g082920.2.1	Tomato	nucleus, plastid	88.57	88.31
CDY46766	Canola	endoplasmic reticulum	85.11	88.16
CDY23972	Canola	endoplasmic reticulum	85.11	88.16
CDX84809	Canola	endoplasmic reticulum	85.11	88.16
CDX79726	Canola	endoplasmic reticulum	85.11	88.16
CDY13371	Canola	cytosol, endoplasmic reticulum	89.17	88.11
AT5G42020.3	Thale cress	endoplasmic reticulum	88.87	87.82
KRH60091	Soybean	nucleus	91.73	87.02
Solyc06g052050.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	80.75	86.75
Bra023110.1-P	Field mustard	endoplasmic reticulum	83.46	86.45
KRH41372	Soybean	endoplasmic reticulum	91.13	85.59
GSMUA_Achr4P11940_001	Banana	cytosol	91.88	84.63
Os05t0428600-01	Rice	extracellular, plasma membrane	74.29	71.91
Os03t0710500-00	Rice	extracellular, plasma membrane	72.03	71.6
Os05t0367800-00	Rice	plasma membrane	67.82	67.41
Os08t0197700-00	Rice	plasma membrane	74.29	64.66
Os01t0840100-01	Rice	nucleus, plasma membrane, plastid	62.56	64.2
Os05t0460000-01	Rice	cytosol, nucleus, plastid	62.11	63.93
Os03t0277300-01	Rice	plastid	62.71	63.86
Os03t0276500-01	Rice	plasma membrane	62.11	63.54
Os03t0821100-01	Rice	plasma membrane	61.8	63.33
Os11t0703900-01	Rice	extracellular, plasma membrane	61.35	62.87
Os03t0276800-01	Rice	cytosol	47.22	56.07
Os11t0187600-01	Rice	cytosol	39.1	53.17
Os11t0187500-01	Rice	cytosol, mitochondrion, plastid	43.01	49.57
Os02t0774300-01	Rice	mitochondrion	48.42	47.42
Os03t0113700-01	Rice	mitochondrion	48.12	47.34
Os05t0303000-01	Rice	plastid	32.33	46.84
Os09t0491772-01	Rice	mitochondrion	47.22	45.91
Os12t0244100-01	Rice	plastid	46.92	44.7

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	EntrezGene:4328075
EMBL:AF006825	ProteinID:BAD07713.1	ProteinID:BAD07938.1	ProteinID:BAF07589.1	ProteinID:BAS76651.1	ProteinID:BAS76652.1
ncoils:Coil	ProteinID:EAZ21491.1	EMBL:EU267978	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005783	GO:GO:0005788	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987
GO:GO:0016020	GO:GO:0034975	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	EnsemblPlantsGene:Os02g0115900	EnsemblPlants:Os02t0115900-02	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF317	UniProt:Q6Z7B0
SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00002367AF
RefSeq:XP_015625618.1	SEG:seg	:	:	:	:

Description

ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2Endosperm lumenal binding protein. (Os02t0115900-01);Endosperm lumenal binding protein. (Os02t0115900-02);Similar to Endosperm lumenal binding protein. (Os02t0115900-03)

Coordinates

chr2:-:838743..842638

Molecular Weight (calculated)

73394.3 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.471

Length

665 amino acids

Sequence
(BLAST)

001: MDRVRGCAFL LGVLLAGSLF AFSVAKEETK KLGTVIGIDL GTTYSCVGVY KNGHVEIIAN DQGNRITPSW VAFTDSERLI GEAAKNQAAV NPERTIFDVK
101: RLIGRKFEDK EVQRDMKLVP YKIVNKDGKP YIQVKIKDGE NKVFSPEEVS AMILGKMKET AEAYLGKKIN DAVVTVPAYF NDAQRQATKD AGVIAGLNVA
201: RIINEPTAAA IAYGLDKKGG EKNILVFDLG GGTFDVSILT IDNGVFEVLA TNGDTHLGGE DFDQRIMEYF IKLIKKKYSK DISKDNRALG KLRREAERAK
301: RALSNQHQVR VEIESLFDGT DFSEPLTRAR FEELNNDLFR KTMGPVKKAM DDAGLEKSQI HEIVLVGGST RIPKVQQLLR DYFEGKEPNK GVNPDEAVAY
401: GAAVQGSILS GEGGDETKDI LLLDVAPLTL GIETVGGVMT KLIPRNTVIP TKKSQVFTTY QDQQTTVSIQ VFEGERSMTK DCRLLGKFDL SGIPAAPRGT
501: PQIEVTFEVD ANGILNVKAE DKGTGKSEKI TITNEKGRLS QEEIDRMVRE AEEFAEEDKK VKERIDARNQ LETYVYNMKN TVGDKDKLAD KLESEEKEKV
601: EEALKEALEW LDENQTAEKE EYEEKLKEVE AVCNPIISAV YQRTGGAPGG GADGEGGVDD EHDEL

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.