Factsheet for Solyc06g052050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, unclear, nucleus

Predictor Summary:

cytosol 1
endoplasmic reticulum 9
extracellular 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, unclear
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum, mitochondrion, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

nucleus: 25464976
unclear: 26455813

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	83.36	84.59
Solyc08g082820.2.1	Tomato	extracellular	90.79	84.38
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	81.26	83.69
Solyc03g082920.2.1	Tomato	nucleus, plastid	89.98	83.51
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	89.34	82.91
CDX67525	Canola	endoplasmic reticulum	76.74	82.32
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	88.37	82.01
Zm00001d014993_P001	Maize	endoplasmic reticulum	87.24	81.45
TraesCS6A01G042600.1	Wheat	golgi	87.4	81.35
TraesCS6D01G049100.1	Wheat	golgi	87.24	81.2
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	87.24	81.2
Bra028521.1-P	Field mustard	endoplasmic reticulum	87.08	81.05
AT5G28540.1	Thale cress	endoplasmic reticulum	87.56	81.02
Zm00001d054043_P007	Maize	endoplasmic reticulum	86.75	81.0
AT5G42020.3	Thale cress	endoplasmic reticulum	87.88	80.83
Os02t0115900-02	Rice	plasma membrane	86.75	80.75
Bra015047.1-P	Field mustard	endoplasmic reticulum	86.75	80.63
Bra022819.1-P	Field mustard	endoplasmic reticulum	86.91	80.42
CDY63497	Canola	endoplasmic reticulum	83.04	80.06
CDX84809	Canola	endoplasmic reticulum	83.04	80.06
CDY46766	Canola	endoplasmic reticulum	83.04	80.06
CDY23972	Canola	endoplasmic reticulum	83.04	80.06
CDX79726	Canola	endoplasmic reticulum	82.88	79.91
CDX77423	Canola	cytosol, endoplasmic reticulum	82.88	79.91
CDY13371	Canola	cytosol, endoplasmic reticulum	86.75	79.79
Bra023110.1-P	Field mustard	endoplasmic reticulum	81.26	78.35
KXG29291	Sorghum	plasma membrane	84.17	76.84
GSMUA_Achr4P11940_001	Banana	cytosol	87.72	75.21
Solyc01g099660.2.1	Tomato	extracellular	74.96	69.36
Solyc06g076020.2.1	Tomato	cytosol, nucleus, plastid, unclear	61.87	59.1
Solyc10g086410.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, nucleus, unclear	61.39	59.01
Solyc11g066100.1.1	Tomato	cytosol, unclear	62.2	58.87
Solyc04g011440.2.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	61.87	58.83
Solyc09g010630.2.1	Tomato	extracellular	61.23	58.4
Solyc03g117630.1.1	Tomato	cytosol	61.55	58.26
GSMUA_Achr5P10770_001	Banana	cytosol	69.14	57.99
Solyc07g005820.2.1	Tomato	cytosol	60.42	57.19
Solyc11g066060.1.1	Tomato	extracellular, nucleus, unclear	61.55	54.58
Solyc01g106260.2.1	Tomato	plastid	49.11	45.37
Solyc01g106210.2.1	Tomato	plastid	49.6	45.08
Solyc11g020040.1.1	Tomato	plastid	46.85	41.91
Solyc01g103450.2.1	Tomato	plastid	46.69	41.11

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	UniProt:K4C5Z1	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PFscan:PS51257	PANTHER:PTHR19375
PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc06g052050.2
EnsemblPlants:Solyc06g052050.2.1	UniParc:UPI0002767298	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:+:35713191..35716219

Molecular Weight (calculated)

67517.1 Da

IEP (calculated)

4.776

GRAVY (calculated)

-0.389

Length

619 amino acids

Sequence
(BLAST)

001: MAGGAWKLSA SWIILFGCLF AYSVANEEAS KLGTVIGIDL GTTYSCVGVY KNGHVEIIAN DQGNRITPSW VSFTDGERLI GEAAKNLAAV NPERTIFDVK
101: RLIGRKFEDR EVQRDMKLVP YKIVNTDGKP YIQVKIKDGE NKVFSPEEIS AMILTKMKET AEAFLGKKIN DAVVTVPAYF NDAQRQATKD AGVIAGLNVA
201: RIINEPTAAT IAYGLDKKGG EKNILVFDLG GGTFDVSILT IDNGVFEVLA TNGDTHLGED HGVIKKKHGK DISKDNRALG KLRREAERAK RSLSSQHQVR
301: VEIESLFDGV DFSEALTRAR FEELNNDLFR KTMGPVKKAM EDAGLGKNQI DEIVLVGGST RIPKVQQLLK DYFDGKEPSK GVNPDEAVAY GAAVQGGILS
401: GEGGDETKNI LLLDVAPLTL GIETVGGVMT KLIPRNTVIP TKKSQVFTTY KDQQTTVTIQ VFEGERSLTK DCRQLGKFDL TGVAPAPRGT PQIEVTFAVD
501: ANGILDVKAE DKASGKSEKI TITNDKGRLS QEEIERMVKE AEDFDKLADK LDSDEKEKIE TVTKEALEWL DDNQSGEKED YDEKLKEVEA VCNPIITAVY
601: QRSGGAPEGE SGAGDDDEL

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.