Factsheet for TraesCS6A01G042600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

plastid: 22160430
golgi: 23128297

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	99.85	99.85
TraesCS6D01G049100.1	Wheat	golgi	99.85	99.85
Zm00001d014993_P001	Maize	endoplasmic reticulum	95.49	95.78
Os02t0115900-02	Rice	plasma membrane	95.64	95.64
Zm00001d054043_P007	Maize	endoplasmic reticulum	95.04	95.32
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	84.36	91.97
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	82.71	91.51
KRH41370	Soybean	endoplasmic reticulum	91.13	90.85
KRH60086	Soybean	endoplasmic reticulum	91.13	90.72
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	90.38	90.1
Solyc08g082820.2.1	Tomato	extracellular	89.62	89.49
KXG29291	Sorghum	plasma membrane	91.13	89.38
PGSC0003DMT400047710	Potato	endoplasmic reticulum	89.62	89.22
PGSC0003DMT400031937	Potato	extracellular	89.17	88.91
Solyc03g082920.2.1	Tomato	nucleus, plastid	89.02	88.76
AT5G28540.1	Thale cress	endoplasmic reticulum	89.17	88.64
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	88.87	88.61
Bra028521.1-P	Field mustard	endoplasmic reticulum	88.57	88.57
Bra022819.1-P	Field mustard	endoplasmic reticulum	89.02	88.49
CDY63497	Canola	endoplasmic reticulum	85.41	88.47
CDY46766	Canola	endoplasmic reticulum	85.11	88.16
CDY23972	Canola	endoplasmic reticulum	85.11	88.16
CDX84809	Canola	endoplasmic reticulum	85.11	88.16
CDX79726	Canola	endoplasmic reticulum	85.11	88.16
Bra015047.1-P	Field mustard	endoplasmic reticulum	88.27	88.14
CDX77423	Canola	cytosol, endoplasmic reticulum	84.96	88.01
AT5G42020.3	Thale cress	endoplasmic reticulum	89.02	87.96
CDX67525	Canola	endoplasmic reticulum	76.24	87.87
CDY13371	Canola	cytosol, endoplasmic reticulum	88.57	87.52
Solyc06g052050.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	81.35	87.4
Bra023110.1-P	Field mustard	endoplasmic reticulum	83.61	86.6
KRH60091	Soybean	nucleus	91.13	86.45
KRH41372	Soybean	endoplasmic reticulum	90.53	85.03
GSMUA_Achr4P11940_001	Banana	cytosol	91.13	83.93
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	76.84	77.66
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	76.24	76.82
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	68.42	68.22
TraesCS4A01G175100.1	Wheat	cytosol	54.59	65.29
TraesCS1A01G285000.2	Wheat	cytosol, golgi	61.35	62.96
TraesCS5A01G479300.1	Wheat	golgi	61.2	62.81
TraesCS5A01G078000.1	Wheat	cytosol, nucleus	60.75	62.44
TraesCS6A01G337100.4	Wheat	cytosol	60.75	62.44
TraesCS4A01G097900.2	Wheat	cytosol	61.2	62.14
TraesCS4A01G098600.1	Wheat	cytosol	62.41	62.03
TraesCS2A01G507000.2	Wheat	cytosol	42.26	57.94
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	46.02	57.3
TraesCS6A01G342500.1	Wheat	cytosol	46.17	56.54
TraesCS6A01G342900.1	Wheat	cytosol	41.2	56.15
TraesCS4A01G098100.1	Wheat	cytosol	48.42	54.76
TraesCS4A01G098200.1	Wheat	cytosol	43.91	53.58
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	40.6	52.22
TraesCS1A01G295600.1	Wheat	mitochondrion	47.97	46.71
TraesCS3A01G305100.3	Wheat	mitochondrion	47.97	46.64
TraesCS5A01G268100.1	Wheat	mitochondrion	47.37	46.05
TraesCS1A01G133100.2	Wheat	golgi	46.92	45.61
TraesCS5A01G106200.2	Wheat	plastid	46.77	45.07
TraesCS3A01G262900.1	Wheat	peroxisome	40.75	43.92

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	ncoils:Coil
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783
GO:GO:0005788	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987	GO:GO:0016020	GO:GO:0034975
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6A01G042600
EnsemblPlants:TraesCS6A01G042600.1	TIGR:cd10241	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:-:22442891..22446356

Molecular Weight (calculated)

73204.1 Da

IEP (calculated)

4.847

GRAVY (calculated)

-0.473

Length

665 amino acids

Sequence
(BLAST)

001: MDRLRGSALL LGVLLAGSLF ALCAAKEEAK KLGTVIGIDL GTTYSCVGVY KNGHVEIIAN DQGNRITPSW VGFTDGERLI GEAAKNQAAV NPERTVFDVK
101: RLIGRKFEDK EVQRDMKLVP YKIVNKEGKP YIQVKIKDGE TKVFSPEEIS AMILGKMKET AEAYLGKKIN DAVVTVPAYF NDAQRQATKD AGVIAGLNVA
201: RIINEPTAAA IAYGLDKRGG EKNILVFDLG GGTFDVSILT IDNGVFEVLA TNGDTHLGGE DFDHRIMDYF IKLIKKKHGK DISKDNRALG KLRREAERAK
301: RALSNQHQVR VEIESLFDGT DFSEPLTRAR FEELNNDLFR KTMGPVKKAM DDAGLEKTQI HEIVLVGGST RIPKVQQLLR DYFDGKEPNK GVNPDEAVAF
401: GAAVQGSILS GEGGDETKDI LLLDVAPLTL GIETVGGVMT KLIPRNTVIP TKKSQVFTTY QDQQTTVSIQ VFEGERSMTK DCRLLGKFDL SGIPPAPRGT
501: PQIEVTFEVD ANGILNVKAE DKGTGKSEKI TITNEKGRLS QEEIDRMVKE AEEFAEEDKK VKERIDARNQ LETYVYNMKN TVGDKDKLAD KLESEEKEKV
601: EEALKEALEW LDENQTAEKE DYEEKLKEVE AVCNPIVSAV YQRSGGAPGG EGADGGVDDE DHDEL

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.