Factsheet for TraesCS2A01G506900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G112630.2	Barley	cytosol	73.89	75.35
TraesCS2A01G507000.2	Wheat	cytosol	68.47	72.99
TraesCS2B01G535000.2	Wheat	cytosol	70.6	68.35
TraesCS6A01G342900.1	Wheat	cytosol	61.32	64.96
TraesCS6A01G342500.1	Wheat	cytosol	67.7	64.46
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	66.34	64.23
TraesCS4A01G098100.1	Wheat	cytosol	72.15	63.44
TraesCS4A01G098200.1	Wheat	cytosol	65.18	61.83
TraesCS4A01G175100.1	Wheat	cytosol	62.86	58.45
Os03t0276800-01	Rice	cytosol	59.96	55.36
TraesCS1A01G285000.2	Wheat	cytosol, golgi	63.64	50.77
TraesCS4A01G097900.2	Wheat	cytosol	64.22	50.69
TraesCS5A01G479300.1	Wheat	golgi	63.25	50.46
TraesCS6A01G337100.4	Wheat	cytosol	63.06	50.39
TraesCS5A01G078000.1	Wheat	cytosol, nucleus	62.86	50.23
TraesCS4A01G098600.1	Wheat	cytosol	63.06	48.73
GSMUA_Achr6P15270_001	Banana	cytosol	41.97	47.48
KRH01651	Soybean	cytosol	53.77	46.18
KRH11084	Soybean	endoplasmic reticulum	56.29	45.4
KRH49659	Soybean	endoplasmic reticulum	54.74	44.71
KRH11083	Soybean	cytosol, endoplasmic reticulum	49.32	43.37
KRH01609	Soybean	cytosol	54.74	42.05
KRH01610	Soybean	cytosol, endoplasmic reticulum	53.77	41.31
TraesCS6A01G042600.1	Wheat	golgi	52.22	40.6
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	50.87	39.97
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	50.48	39.55
TraesCS3A01G262900.1	Wheat	peroxisome	45.84	38.41
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	49.32	38.23
KRH21163	Soybean	endoplasmic reticulum	33.46	35.38
KRH70355	Soybean	cytosol	55.51	32.17
TraesCS5A01G268100.1	Wheat	mitochondrion	42.36	32.02
TraesCS1A01G133100.2	Wheat	golgi	41.2	31.14
TraesCS3A01G305100.3	Wheat	mitochondrion	40.81	30.85
TraesCS1A01G295600.1	Wheat	mitochondrion	40.62	30.75
TraesCS5A01G106200.2	Wheat	plastid	40.43	30.29

Protein Annotations

EnsemblPlants:TraesCS2A01G506900.1	EnsemblPlantsGene:TraesCS2A01G506900	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	PANTHER:PTHR19375	PANTHER:PTHR19375:SF311
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00329	ScanProsite:PS01036	SEG:seg	SUPFAM:SSF100920
SUPFAM:SSF53067	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:734585213..734587873

Molecular Weight (calculated)

56658.4 Da

IEP (calculated)

8.338

GRAVY (calculated)

-0.225

Length

517 amino acids

Sequence
(BLAST)

001: MAAAAVREPQ QLLSIPHPST GVGHASNSSK TVPISTTPPA PANAKRLIGR KFSDASVQGD IKLWSFKVIS GPADRPMMAV QYGGEEKHFT AEEISSMILV
101: KMKETAEAYL GTSVKNVVIT VPVYFNDSQR QATIDAGAIA GLNVMRIINE PSAAAIAYGL DKMPCSGEVK TVLIFDLGGG TMDVSIISVQ NGVFTVKATS
201: GDTQMGGQDL NNRMVEHFVQ DFLKKHRSDI RGSPRALMRL RTACERAKRM LSSAVEAKFE IDSLHDSIDY YGRITRARFE ELNMDLFRKC IKHVEKCLSD
301: AKMDKSQIHD VVLVGGSTRI PKVQQLLQDF FDGKTLCKSI NPDEAVAYGA AVQAAALSGE CDRKGQDFLL LDVTPLSLGV EVYDWRVDHY IPGVMSVLVP
401: RNTTIPLKRE GRYTSGFDNQ TSVLIKVYEG EGEWTKDNRL LGEFMLEGLV PAPRGVPKII EMMEVEANGI LKVTAVDMTT GSKKSINITT NKGGLSKEDI
501: ERMVKDAEKY RSRTGRG

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.