CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01609	Soybean	cytosol	84.25	84.25
KRH29811	Soybean	nucleus	64.04	66.41
KRH24810	Soybean	nucleus	64.04	66.41
KRH01631	Soybean	endoplasmic reticulum	63.89	66.26
KRH19702	Soybean	endoplasmic reticulum	61.37	65.35
KRH67530	Soybean	endoplasmic reticulum, nucleus	63.3	65.24
KRG95806	Soybean	nucleus	63.3	65.14
KRH03029	Soybean	nucleus	61.37	64.03
KRH70484	Soybean	cytosol	53.05	63.75
KRH72327	Soybean	endoplasmic reticulum	61.52	63.5
GSMUA_Achr6P15270_001	Banana	cytosol	42.35	62.36
TraesCS6D01G322700.1	Wheat	cytosol	41.01	61.47
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	48.74	61.42
TraesCS6B01G374500.1	Wheat	cytosol	42.05	61.12
TraesCS6A01G342500.1	Wheat	cytosol	48.89	60.59
Os03t0276800-01	Rice	cytosol	49.93	60.0
KRH01651	Soybean	cytosol	53.49	59.8
TraesCS2A01G507000.2	Wheat	cytosol	43.09	59.79
TraesCS6B01G374600.1	Wheat	cytosol	45.17	59.38
HORVU6Hr1G082600.1	Barley	cytosol, mitochondrion	42.64	59.3
Zm00001d028639_P001	Maize	cytosol	47.4	59.07
TraesCS6B01G374400.1	Wheat	cytosol	48.44	59.06
TraesCS4D01G207100.1	Wheat	cytosol	42.5	58.73
KXG39675	Sorghum	cytosol	46.81	58.66
HORVU2Hr1G112630.2	Barley	cytosol	43.98	58.38
KXG39678	Sorghum	cytosol	48.14	58.27
KRH49659	Soybean	endoplasmic reticulum	54.53	57.98
TraesCS6D01G322800.1	Wheat	cytosol	44.13	57.89
HORVU6Hr1G082510.2	Barley	cytosol	40.86	57.77
TraesCS4B01G206400.1	Wheat	cytosol	49.93	57.14
EER95094	Sorghum	cytosol	47.25	56.99
OQU92816	Sorghum	cytosol	36.7	56.91
EER95091	Sorghum	cytosol	47.85	56.89
TraesCS4A01G098200.1	Wheat	cytosol	46.06	56.88
TraesCS6A01G342900.1	Wheat	cytosol	41.01	56.56
KXG39677	Sorghum	cytosol	46.21	56.55
TraesCS4A01G098100.1	Wheat	cytosol	49.18	56.29
KRH11084	Soybean	endoplasmic reticulum	53.05	55.69
Os11t0187600-01	Rice	cytosol	40.42	55.62
HORVU6Hr1G009570.1	Barley	cytosol	35.22	55.12
EER92471	Sorghum	cytosol	46.66	54.9
Os11t0187500-01	Rice	cytosol, mitochondrion, plastid	46.81	54.59
HORVU4Hr1G059210.1	Barley	cytosol, mitochondrion, plastid	37.44	54.31
KRH11083	Soybean	cytosol, endoplasmic reticulum	47.1	53.91
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	41.31	53.77
TraesCS2B01G535000.2	Wheat	cytosol	42.5	53.56
EER95090	Sorghum	cytosol	45.02	53.06
HORVU6Hr1G094830.1	Barley	cytosol	47.1	52.14
TraesCS6D01G339700.1	Wheat	cytosol	46.21	51.75
OQU92815	Sorghum	cytosol	28.83	50.92
TraesCS4B01G206300.1	Wheat	cytosol	47.7	50.31
KRH41370	Soybean	endoplasmic reticulum	49.18	49.63
KRH60086	Soybean	endoplasmic reticulum	49.18	49.55
KRH60091	Soybean	nucleus	49.03	47.08
KRH41372	Soybean	endoplasmic reticulum	48.44	46.05
KRH26302	Soybean	plastid	18.43	44.93
KRH21163	Soybean	endoplasmic reticulum	30.91	42.54
KRH70355	Soybean	cytosol	55.13	41.59
KRH42039	Soybean	mitochondrion	39.97	39.73
KRH49859	Soybean	endoplasmic reticulum, nucleus	39.82	39.59
KRH21710	Soybean	endoplasmic reticulum	39.52	39.47
KRH10640	Soybean	nucleus	39.38	39.32
KRH06058	Soybean	mitochondrion	39.97	39.04
TraesCS6D01G339800.1	Wheat	nucleus	43.39	36.82
TraesCS6D01G339600.1	Wheat	cytosol	47.55	34.48
KRH26303	Soybean	cytosol, endoplasmic reticulum	12.78	32.21

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100783822	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
MapMan:35.1	EMBL:ACUP02011523	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G287900	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
UniProt:I1N541	InterPro:IPR029047	InterPro:IPR029048	EnsemblPlants:KRH01610	ProteinID:KRH01610	ProteinID:KRH01610.1
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF325	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI000233F131	:

Description

hypothetical protein

Coordinates

chr18:+:56777135..56784200

Molecular Weight (calculated)

74714.3 Da

IEP (calculated)

6.074

GRAVY (calculated)

-0.295

Length

673 amino acids

Sequence
(BLAST)

001: MATNGKTPAI GIDLGTTYSC VAVWQRDRVE IIANDQGNRT TPSYVAFNNT QRMIGDAAKN QAATNPTNTV FDAKRLIGRR FSDQEVQSDM ELWPFKVIAD
101: VNGKPMIAVD YNCEKKQFSA EEISSMVLAK MLDIAESFLG STVKNAVITV PAYFNDSQRQ ATKDAGKIAG LNVLRILHEP TAAAIAYRLE MKNCNNDRRN
201: VFVFDLGGGT LDVSLLVFEK DHIRVKATTG DTHLGGEDFD NNMVTYCVKE FKRKNKMDIS GNKRALRRLR TACEKAKRIL SCSTMTTIEV DSLYDGIDFH
301: SSISRAKFEE LNKDYLNKCI EFVGKCLIDA KMDKSSVHDV VLAGGSTRIP KLQQLLSDFF DGKDLCKCIN ADEAVAYGAA VHAYMLNGES SEKVQNASLW
401: EVTPLSLGLQ EDGGIMKVII PRNTSIPTKM EDVLTTHFDN QTNILIHVYE GERKRTRDNN LLGKFVLEIP PVPRGVPQIS VCFELDYDGI LHVSAEEKSR
501: GISKKLAITN DKGRLSKKEI ERMISEAEKY KAEDEMYRNK VQSRHALEKY AYNMRDAINI KEISLKLSPE DKKNINDAID SALEWLEVSM DANPNDFDNM
601: RSTLSSVFNP VIVKMIKDED NVAPPDTVAS SGSNSVKNGL LSILANFALD AVYSAATGDI IGFASVIVDC LSI

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.