Factsheet for TraesCS6D01G339800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G009570.1	Barley	cytosol	34.05	62.79
TraesCS6D01G339700.1	Wheat	cytosol	45.4	59.9
HORVU6Hr1G094830.1	Barley	cytosol	40.61	52.96
TraesCS6D01G322700.1	Wheat	cytosol	29.76	52.56
TraesCS4D01G207500.1	Wheat	cytosol	42.24	51.46
TraesCS6D01G317700.1	Wheat	cytosol	40.98	50.23
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	40.98	50.23
TraesCS3D01G352400.2	Wheat	cytosol, golgi	40.98	50.23
TraesCS4D01G206600.1	Wheat	cytosol	41.61	50.23
TraesCS4D01G140800.1	Wheat	cytosol, nucleus	40.98	50.15
TraesCS3D01G351900.1	Wheat	cytosol	40.98	49.85
GSMUA_Achr6P15270_001	Banana	cytosol	28.63	49.67
TraesCS5D01G492900.2	Wheat	cytosol	40.48	49.54
TraesCS1D01G284000.2	Wheat	cytosol, golgi	40.35	49.38
TraesCS4D01G207100.1	Wheat	cytosol	30.26	49.28
TraesCS6D01G322800.1	Wheat	cytosol	31.78	49.12
TraesCS6D01G402500.1	Wheat	cytosol	31.65	48.46
KRH49659	Soybean	endoplasmic reticulum	36.44	45.66
KRH01651	Soybean	cytosol	34.55	45.51
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	34.55	45.07
KRH01609	Soybean	cytosol	38.08	44.87
KRH11083	Soybean	cytosol, endoplasmic reticulum	32.91	44.39
KRH11084	Soybean	endoplasmic reticulum	35.69	44.15
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	36.44	43.79
KRH01610	Soybean	cytosol, endoplasmic reticulum	36.82	43.39
TraesCS6D01G049100.1	Wheat	golgi	35.81	42.71
TraesCS2D01G600900.1	Wheat	endoplasmic reticulum	34.68	41.17
TraesCS3D01G262800.1	Wheat	cytosol	31.02	40.07
TraesCS1D01G452500.1	Wheat	cytosol	25.6	39.11
TraesCS6D01G339600.1	Wheat	cytosol	45.15	38.58
KRH21163	Soybean	endoplasmic reticulum	21.31	34.56
TraesCS5D01G276100.1	Wheat	mitochondrion	29.63	34.36
KRH70355	Soybean	cytosol	38.59	34.3
TraesCS1D01G131800.1	Wheat	plastid	29.13	33.87
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	28.63	33.63
TraesCS3D01G296700.1	Wheat	golgi	28.88	33.53
TraesCS5D01G117600.1	Wheat	plastid	28.75	33.04

Protein Annotations

EnsemblPlants:TraesCS6D01G339800.1	EnsemblPlantsGene:TraesCS6D01G339800	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	PANTHER:PTHR19375	PANTHER:PTHR19375:SF325
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	SEG:seg
SUPFAM:SSF100920	SUPFAM:SSF53067	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6D:+:438971345..438973804

Molecular Weight (calculated)

79966.0 Da

IEP (calculated)

8.058

GRAVY (calculated)

-0.421

Length

793 amino acids

Sequence
(BLAST)

001: MAQDRLVMGV DLGTTNSCVG VWLNGRVEIV PSDQGTRTTP SCVAFTDRER LIGEGANHQV ATNASNTVFD VKRLIGRSFS KTDAKYWPFQ VTEDSNDNPR
101: IKVSYLGKEK EFSPEEISAM VLVKMKETAE AYFNRSRQRQ AVVPLITTAV ITVPAYFNGS QRQATMDAGF IAGFNFMRII NEPTAAAIAF SVNRDCSKST
201: VLVYDLGGGT LDVSLLVIKK GVLQVMATSG DSHLGGEDFT NNMVDRFVNE FKSKNPHIRS DISCDKKALG RLRRSCEDAK RRLSTVPLIP VEVDALFQGI
301: DFQSTITRDQ FQELNVDLFS RCMEPVRRCL ADAKMDKNKV DDVVLVGGST RIPHVLKLVK DFFGGKELSR NINADEAVAY GATVQAAVLT FPGLNLPKVL
401: DITPFSHGIG MPQGVMCVLF PRNTTIPTRW SNEMEFTTRK GNPSSLDIKL YEGERASLSV LSWSNAIKVL FRMDVNGMLR VRATDHESGQ EGKVTIRNNV
501: RRLRTEEIER MVKDANNYKA QDEDYRKNVQ ARNDIENLLY TMANTIMKLQ DLVARLLLHE ATPEEETQTP AYQDSAARLL PEATPEEETQ TPAHQDSAAR
601: LLLEATPEEE TQTPAHQDSA ARLLPEAIPE EETQTPGHQD SXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
701: XXXXXXXXXX XXXXIAPGGN SRRRNTNSST TELSCKIAPG GNSRRRKTNY RATGLSCKIA PGGNSRRRNT NYRRPCGLHT RTHAIYLPLG SPE

Best Arabidopsis Sequence Match ( AT1G56410.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDASVQSDM KFWPFKVTPG
101: QADKPMIFVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG SSIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGIKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GDARALRRLR TACERAKRTL SSTAQTTVEV DSLFEGIDFY
301: SPITRAKFEE MNMDLFRKCM EPVMKCLRDS KMDKSMVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGIE TIGGVMTTLI QRNTTIPAKK EQEFTTTVDN QPDVLIQVYE GERARTIDNN ILGQFVLSGI PPAPRGIPQF TVCFDIDSNG ILNVSAEDKA
501: TGKKNKITIT NDKGRLSKDD IEKMVQEAEK YKSEDEEHKK KVEAKNGLEN YAYNVGNTLR DMGEKLPAAD KKKFEDSIEE VIQWLDDNQL AEADEFEHKM
601: KELESVWSTI ITKMYQG

Arabidopsis Description

HSP70-18Heat shock 70 kDa protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.