Factsheet for TraesCS3D01G352400.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 23128297

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3B01G255300.1
TraesCS3D01G227500.3
TraesCS4A01G322300.1
TraesCS5B01G556200.1
TraesCS5D01G553300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G12580.1	TraesCS3B01G255300.1	AT4G11260.1	18065690
AT3G12580.1	TraesCS3D01G227500.3	AT4G11260.1	18065690
AT3G12580.1	TraesCS4A01G322300.1	AT4G17750.1	11807141
AT3G12580.1	TraesCS5B01G556200.1	AT4G17750.1	11807141
AT3G12580.1	TraesCS5D01G553300.1	AT4G17750.1	11807141

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G351900.1	Wheat	cytosol	99.85	99.08
TraesCS3B01G390800.1	Wheat	cytosol	94.13	98.23
Zm00001d012420_P001	Maize	plasma membrane	94.75	94.6
Zm00001d042922_P002	Maize	cytosol	94.59	94.44
Os05t0460000-01	Rice	cytosol, nucleus, plastid	93.97	94.12
EES01731	Sorghum	cytosol	94.13	93.98
KXG26133	Sorghum	cytosol	89.34	93.83
TraesCS1D01G284000.2	Wheat	cytosol, golgi	93.2	93.06
Bra001457.1-P	Field mustard	cytosol	84.54	93.03
CDX73815	Canola	cytosol	92.74	92.02
TraesCS4D01G140800.1	Wheat	cytosol, nucleus	92.12	91.98
KRH70484	Soybean	cytosol	79.6	91.96
CDY52661	Canola	cytosol	91.81	91.81
TraesCS4D01G207500.1	Wheat	cytosol	92.27	91.71
CDY00784	Canola	cytosol	92.12	91.69
CDY50531	Canola	cytosol	92.12	91.69
TraesCS5D01G492900.2	Wheat	cytosol	91.81	91.67
Bra038734.1-P	Field mustard	cytosol	91.96	91.54
KRH01631	Soybean	endoplasmic reticulum	91.81	91.53
TraesCS6D01G317700.1	Wheat	cytosol	91.34	91.34
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	91.19	91.19
HORVU3Hr1G086500.3	Barley	cytosol, plastid	98.92	90.78
AT3G12580.1	Thale cress	cytosol	91.19	90.77
TraesCS4D01G206600.1	Wheat	cytosol	89.34	87.98
TraesCS6D01G402500.1	Wheat	cytosol	58.73	73.36
TraesCS6D01G322700.1	Wheat	cytosol	48.84	70.38
TraesCS4D01G207100.1	Wheat	cytosol	52.4	69.61
TraesCS6D01G322800.1	Wheat	cytosol	51.78	65.3
TraesCS6D01G049100.1	Wheat	golgi	63.68	61.95
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	56.57	60.2
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	60.43	59.24
TraesCS6D01G339700.1	Wheat	cytosol	53.79	57.9
TraesCS1D01G452500.1	Wheat	cytosol	44.98	56.07
TraesCS2D01G600900.1	Wheat	endoplasmic reticulum	57.65	55.84
TraesCS3D01G262800.1	Wheat	cytosol	50.08	52.77
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	46.83	44.89
TraesCS3D01G296700.1	Wheat	golgi	46.99	44.51
TraesCS5D01G276100.1	Wheat	mitochondrion	46.83	44.3
TraesCS1D01G131800.1	Wheat	plastid	45.9	43.55
TraesCS5D01G117600.1	Wheat	plastid	45.29	42.46
TraesCS6D01G339800.1	Wheat	nucleus	50.23	40.98
TraesCS6D01G339600.1	Wheat	cytosol	56.88	39.66

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
ncoils:Coil	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF323	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS3D01G352400
EnsemblPlants:TraesCS3D01G352400.2	TIGR:cd10233	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:-:463189892..463192601

Molecular Weight (calculated)

70671.4 Da

IEP (calculated)

4.907

GRAVY (calculated)

-0.370

Length

647 amino acids

Sequence
(BLAST)

001: MAKGGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVGFTDT ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR FTDPSVQSDM KLWPFKVIPG
101: PADKPMIVVQ YKGEEKQFAA EEISSMVLIK MKEIGEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKASSSGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKHKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLYEGVDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTTLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVFE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: AGVKNKITIT NDKGRLSKED IEKMVQEAER YKAEDEELKK KVEAKNALEN YAYNMRNTIK DDKIASKLPA ADKKKIEDAI DGAISWLDTN QLAEVDELED
601: KMKELEGVCN PIIAKMYQGV GADMGGMGGE DAPAGGSGAG PKIEEVD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.