Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4B01G206700.1 | Wheat | cytosol | 99.54 | 99.54 |
HORVU4Hr1G059390.1 | Barley | cytosol | 99.39 | 99.39 |
TraesCS4A01G097900.2 | Wheat | cytosol | 99.54 | 98.93 |
Os03t0276500-01 | Rice | plasma membrane | 96.62 | 96.77 |
EER95095 | Sorghum | cytosol | 93.7 | 93.99 |
Zm00001d028630_P005 | Maize | cytosol, extracellular, nucleus, plasma membrane, plastid | 93.24 | 93.53 |
TraesCS4D01G140800.1 | Wheat | cytosol, nucleus | 92.47 | 92.9 |
Bra001457.1-P | Field mustard | cytosol | 83.87 | 92.86 |
KRH01631 | Soybean | endoplasmic reticulum | 92.47 | 92.76 |
TraesCS3D01G352400.2 | Wheat | cytosol, golgi | 91.71 | 92.27 |
TraesCS3D01G351900.1 | Wheat | cytosol | 92.32 | 92.18 |
KRH70484 | Soybean | cytosol | 79.26 | 92.14 |
TraesCS6D01G317700.1 | Wheat | cytosol | 91.4 | 91.96 |
TraesCS5D01G492900.2 | Wheat | cytosol | 91.4 | 91.82 |
TraesCS5D01G093900.1 | Wheat | cytosol, mitochondrion, nucleus | 91.24 | 91.81 |
CDY00784 | Canola | cytosol | 91.55 | 91.69 |
CDX73815 | Canola | cytosol | 91.71 | 91.56 |
CDY50531 | Canola | cytosol | 91.24 | 91.38 |
TraesCS1D01G284000.2 | Wheat | cytosol, golgi | 90.94 | 91.36 |
CDY52661 | Canola | cytosol | 90.78 | 91.34 |
Bra038734.1-P | Field mustard | cytosol | 91.09 | 91.23 |
AT3G12580.1 | Thale cress | cytosol | 90.94 | 91.08 |
TraesCS4D01G206600.1 | Wheat | cytosol | 88.48 | 87.67 |
TraesCS6D01G402500.1 | Wheat | cytosol | 58.53 | 73.55 |
TraesCS6D01G322700.1 | Wheat | cytosol | 48.54 | 70.38 |
TraesCS4D01G207100.1 | Wheat | cytosol | 52.07 | 69.61 |
TraesCS6D01G322800.1 | Wheat | cytosol | 51.77 | 65.69 |
TraesCS6D01G049100.1 | Wheat | golgi | 62.52 | 61.2 |
TraesCS5D01G305500.1 | Wheat | endoplasmic reticulum | 56.07 | 60.03 |
TraesCS6D01G339700.1 | Wheat | cytosol | 55.3 | 59.9 |
TraesCS7D01G423100.1 | Wheat | endoplasmic reticulum | 60.06 | 59.24 |
TraesCS2D01G600900.1 | Wheat | endoplasmic reticulum | 56.22 | 54.79 |
TraesCS1D01G452500.1 | Wheat | cytosol | 43.32 | 54.34 |
TraesCS3D01G262800.1 | Wheat | cytosol | 49.62 | 52.61 |
TraesCS2D01G575200.1 | Wheat | mitochondrion, plastid | 47.0 | 45.33 |
TraesCS3D01G296700.1 | Wheat | golgi | 47.0 | 44.8 |
TraesCS5D01G276100.1 | Wheat | mitochondrion | 46.39 | 44.15 |
TraesCS1D01G131800.1 | Wheat | plastid | 46.08 | 43.99 |
TraesCS5D01G117600.1 | Wheat | plastid | 45.93 | 43.33 |
TraesCS6D01G339800.1 | Wheat | nucleus | 51.46 | 42.24 |
TraesCS6D01G339600.1 | Wheat | cytosol | 57.91 | 40.62 |
Protein Annotations
Gene3D:1.20.1270.10 | MapMan:19.1.5.1 | Gene3D:2.60.34.10 | Gene3D:3.30.30.30 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 |
ncoils:Coil | InterPro:HSP70_C_sf | InterPro:HSP70_peptide-bd_sf | InterPro:Heat_shock_70_CS | InterPro:Hsp_70_fam | InterPro:IPR029047 |
InterPro:IPR029048 | PFAM:PF00012 | PRINTS:PR00301 | ScanProsite:PS00297 | ScanProsite:PS00329 | ScanProsite:PS01036 |
PANTHER:PTHR19375 | PANTHER:PTHR19375:SF243 | SUPFAM:SSF100920 | SUPFAM:SSF100934 | SUPFAM:SSF53067 | EnsemblPlantsGene:TraesCS4D01G207500 |
EnsemblPlants:TraesCS4D01G207500.1 | TIGR:cd10233 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:-:355858489..355860561
Molecular Weight (calculated)
71312.6 Da
IEP (calculated)
4.832
GRAVY (calculated)
-0.452
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKGDGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDT ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FSDSSVQSDA KLWPFKVIPG
101: PADKPMIGVQ YRGEDKQFSA EEISSMVLNK MKETAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKSTSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP RVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILTGEG NEKVQDLLLL
401: DVTPLSQGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKED IEKMVQEAEK YKAEDEEHKK KVDSKNALEN YAYNMRNTIK DDKIASKLPE ADKKKIEDTI DGAITWLDNN QLAEAEEFDD
601: KMKELEGICN PIIAKMYQGA GAEMPGGMDE DAPASAAGGS SGPGPKIEEV D
101: PADKPMIGVQ YRGEDKQFSA EEISSMVLNK MKETAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKSTSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP RVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILTGEG NEKVQDLLLL
401: DVTPLSQGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKED IEKMVQEAEK YKAEDEEHKK KVDSKNALEN YAYNMRNTIK DDKIASKLPE ADKKKIEDTI DGAITWLDNN QLAEAEEFDD
601: KMKELEGICN PIIAKMYQGA GAEMPGGMDE DAPASAAGGS SGPGPKIEEV D
001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD
Arabidopsis Description
HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.