Factsheet for TraesCS3D01G296700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G305100.3	Wheat	mitochondrion	99.41	99.27
TraesCS3B01G331400.4	Wheat	mitochondrion	99.27	99.12
HORVU3Hr1G073230.9	Barley	endoplasmic reticulum, golgi	95.9	93.84
HORVU0Hr1G006930.3	Barley	cytosol	63.84	91.02
Os02t0774300-01	Rice	mitochondrion	89.31	89.84
Zm00001d013842_P003	Maize	mitochondrion	88.29	88.94
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	87.55	88.2
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	86.97	88.0
EER91365	Sorghum	mitochondrion	86.97	87.61
VIT_03s0097g00530.t01	Wine grape	mitochondrion	84.33	84.83
KRH10640	Soybean	nucleus	83.46	84.57
KRH21710	Soybean	endoplasmic reticulum	83.46	84.57
GSMUA_Achr3P12480_001	Banana	mitochondrion	75.4	84.29
KRH42039	Soybean	mitochondrion	83.02	83.75
KRH49859	Soybean	endoplasmic reticulum, nucleus	82.72	83.46
Solyc01g106260.2.1	Tomato	plastid	80.82	82.39
PGSC0003DMT400008101	Potato	mitochondrion	81.11	82.2
PGSC0003DMT400027703	Potato	mitochondrion	81.41	82.13
Solyc01g106210.2.1	Tomato	plastid	81.84	82.09
CDY56552	Canola	mitochondrion	81.7	81.94
VIT_00s0415g00030.t01	Wine grape	mitochondrion	81.7	81.82
CDX81132	Canola	mitochondrion	81.55	81.79
Bra006027.1-P	Field mustard	mitochondrion	81.26	81.5
AT5G09590.1	Thale cress	mitochondrion	81.11	81.23
Bra028628.1-P	Field mustard	mitochondrion	80.67	81.03
CDX85810	Canola	mitochondrion	80.67	81.03
TraesCS5D01G276100.1	Wheat	mitochondrion	77.31	77.19
CDY44807	Canola	mitochondrion	79.06	68.35
TraesCS1D01G131800.1	Wheat	plastid	50.37	50.44
TraesCS5D01G117600.1	Wheat	plastid	50.95	50.43
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	43.05	48.36
TraesCS6D01G049100.1	Wheat	golgi	46.71	47.97
TraesCS5D01G492900.2	Wheat	cytosol	44.8	47.22
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	44.66	47.14
TraesCS1D01G284000.2	Wheat	cytosol, golgi	44.66	47.07
TraesCS4D01G207500.1	Wheat	cytosol	44.8	47.0
TraesCS3D01G352400.2	Wheat	cytosol, golgi	44.51	46.99
TraesCS6D01G317700.1	Wheat	cytosol	44.51	46.99
TraesCS4D01G140800.1	Wheat	cytosol, nucleus	44.51	46.91
TraesCS6D01G402500.1	Wheat	cytosol	35.58	46.91
TraesCS3D01G351900.1	Wheat	cytosol	44.66	46.78
TraesCS4D01G206600.1	Wheat	cytosol	44.22	45.97
TraesCS6D01G322800.1	Wheat	cytosol	33.97	45.22
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	43.48	45.0
TraesCS6D01G322700.1	Wheat	cytosol	29.58	44.99
TraesCS2D01G600900.1	Wheat	endoplasmic reticulum	43.34	44.31
TraesCS1D01G452500.1	Wheat	cytosol	32.8	43.16
TraesCS4D01G207100.1	Wheat	cytosol	30.31	42.51
TraesCS6D01G339700.1	Wheat	cytosol	34.99	39.77
TraesCS3D01G262800.1	Wheat	cytosol	33.24	36.97
TraesCS6D01G339800.1	Wheat	nucleus	33.53	28.88
TraesCS6D01G339600.1	Wheat	cytosol	37.04	27.26

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF333	SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	EnsemblPlantsGene:TraesCS3D01G296700	EnsemblPlants:TraesCS3D01G296700.1
TIGR:cd11733	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:410520057..410523919

Molecular Weight (calculated)

73335.2 Da

IEP (calculated)

5.572

GRAVY (calculated)

-0.337

Length

683 amino acids

Sequence
(BLAST)

001: MRRSAMALRS TADRCFGHHS PLTNVIQSTF SANIGSRWGS LARTFSAKPL GNEVIGIDLG TTNSCVSVME GKNAKVIENS EGTRTTPSVV AFSQKGERLV
101: GTPAKRQAIT NPQNTFFGTK RMIGRRFDDP QTQKEMKMVP YKIVKAPNGD AWVETTDGKQ YSPSQIGAFV LTKMKETAES YLGKSISKAV ITVPAYFNDA
201: QRQATKDAGR IAGLDVQRII NEPTAAALSY GTNNKEGLIA VFDLGGGTFD VSILEISNGV FEVKATNGDT FLGGEDFDNT LLEYLVSEYK RSDNIDLSKD
301: RLALQRLREA AEKAKIELSS TAQTEINLPF ITADAAGAKH LNITLTRSKF ESLVNGLIAR TRDPCKNCLK DAGITTKEVD EVLLVGGMTR VPKVQEVVSE
401: IFGKAPSKGV NPDEAVAMGA ALQGGILRGD VKELLLLDVT PLSLGIETLG GIFTRLITRN TTIPTKKSQV FSTAADNQTQ VGIRVLQGER EMATDNKLLG
501: EFDLVGIPPA PRGLPQIEVT FDIDANGIVT VSAKDKATAK EQQITIRSSG GLSESEIEKM VREAELHSQK DQERKALIDI RNTADTTIYS IEKSLGEYRD
601: KIPAEVATEI ETAVADLRTE MASDDIEKIK SKMEAANKAV SKIGEHMSGG GAAGGGAAGG SQEGGSQGGG DQAPEAEYEE VKK

Best Arabidopsis Sequence Match ( AT5G09590.1 )
(BLAST)

001: MATAALLRSI RRREVVSSPF SAYRCLSSSG KASLNSSYLG QNFRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNTK
101: GELLVGTPAK RQAVTNPTNT VSGTKRLIGR KFDDPQTQKE MKMVPYKIVR APNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSV TKAVVTVPAY
201: FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV NEFKTTEGID
301: LAKDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSRFETLVNH LIERTRDPCK NCLKDAGISA KEVDEVLLVG GMTRVPKVQS
401: IVAEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL ITRNTTIPTK KSQVFSTAAD NQTQVGIRVL QGEREMATDN
501: KLLGEFDLVG IPPSPRGVPQ IEVTFDIDAN GIVTVSAKDK TTGKVQQITI RSSGGLSEDD IQKMVREAEL HAQKDKERKE LIDTKNTADT TIYSIEKSLG
601: EYREKIPSEI AKEIEDAVAD LRSASSGDDL NEIKAKIEAA NKAVSKIGEH MSGGSGGGSA PGGGSEGGSD QAPEAEYEEV KK

Arabidopsis Description

HSP70-10Heat shock 70 kDa protein 10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.