CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56552	Canola	mitochondrion	99.41	99.41
Bra006027.1-P	Field mustard	mitochondrion	98.68	98.68
CDX85810	Canola	mitochondrion	95.74	95.88
AT5G09590.1	Thale cress	mitochondrion	93.98	93.84
KRH21710	Soybean	endoplasmic reticulum	86.49	87.39
KRH10640	Soybean	nucleus	86.34	87.24
KRH42039	Soybean	mitochondrion	85.61	86.12
KRH49859	Soybean	endoplasmic reticulum, nucleus	85.46	85.97
VIT_03s0097g00530.t01	Wine grape	mitochondrion	85.17	85.42
PGSC0003DMT400027703	Potato	mitochondrion	83.7	84.19
EER91365	Sorghum	mitochondrion	83.41	83.78
Zm00001d013842_P003	Maize	mitochondrion	83.26	83.63
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	82.97	83.33
Solyc01g106210.2.1	Tomato	plastid	83.26	83.26
Solyc01g106260.2.1	Tomato	plastid	81.79	83.13
PGSC0003DMT400008101	Potato	mitochondrion	81.79	82.64
Os02t0774300-01	Rice	mitochondrion	82.38	82.62
Os03t0113700-01	Rice	mitochondrion	81.79	82.4
TraesCS3D01G296700.1	Wheat	golgi	81.79	81.55
TraesCS3A01G305100.3	Wheat	mitochondrion	81.64	81.29
TraesCSU01G116400.1	Wheat	mitochondrion	80.18	81.25
CDX90397	Canola	mitochondrion	80.76	81.12
GSMUA_Achr4P19830_001	Banana	mitochondrion	81.06	81.06
CDY44807	Canola	mitochondrion	93.98	81.01
TraesCS3B01G331400.4	Wheat	mitochondrion	81.35	80.99
CDY49682	Canola	mitochondrion	80.91	80.91
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	80.18	80.89
TraesCS1A01G295600.1	Wheat	mitochondrion	80.76	80.53
TraesCS4B01G397600.1	Wheat	mitochondrion	79.59	80.06
CDX69342	Canola	mitochondrion	79.44	79.56
CDX75683	Canola	mitochondrion	79.44	79.33
HORVU0Hr1G006930.3	Barley	cytosol	55.65	79.12
HORVU4Hr1G089090.8	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	78.56	79.03
HORVU3Hr1G073230.9	Barley	endoplasmic reticulum, golgi	80.18	78.22
CDY08914	Canola	cytosol	50.07	54.91
CDY34275	Canola	cytosol	50.22	54.72
CDY24832	Canola	cytosol	50.22	54.72
CDY11007	Canola	cytosol	49.78	54.5
CDX92631	Canola	plastid	52.42	50.42
CDY03462	Canola	plastid	52.72	50.42
CDX67525	Canola	endoplasmic reticulum	41.56	49.05
CDY00784	Canola	cytosol	46.4	48.62
CDY52661	Canola	cytosol	46.11	48.53
CDY33359	Canola	cytosol	36.86	48.46
CDY63497	Canola	endoplasmic reticulum	45.67	48.44
CDX73815	Canola	cytosol	46.26	48.31
CDY50531	Canola	cytosol	46.11	48.31
CDX79726	Canola	endoplasmic reticulum	45.52	48.29
CDX77423	Canola	cytosol, endoplasmic reticulum	45.52	48.29
CDX84809	Canola	endoplasmic reticulum	45.52	48.29
CDY23972	Canola	endoplasmic reticulum	45.52	48.29
CDY22648	Canola	cytosol	42.88	48.26
CDY03461	Canola	plastid	50.22	48.1
CDY35063	Canola	cytosol	36.56	48.07
CDY46766	Canola	endoplasmic reticulum	45.23	47.98
CDY13371	Canola	cytosol, endoplasmic reticulum	46.7	47.25
CDX96825	Canola	cytosol	44.93	47.08
CDX83960	Canola	cytosol	44.93	47.08
CDY06347	Canola	endoplasmic reticulum	43.02	45.64
CDY03459	Canola	cytosol	43.91	45.17
CDY40362	Canola	cytosol, mitochondrion	28.05	42.07
CDY49668	Canola	cytosol	30.25	41.37
CDY49667	Canola	nucleus	1.62	14.67

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
GO:A0A078CWL9	EnsemblPlants:CDX81132	ProteinID:CDX81132	ProteinID:CDX81132.1	InterPro:Chaperone_DnaK	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00134584001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF333
SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI0004EDD37F	SEG:seg	:

Description

BnaC03g03860D

Coordinates

chrLK031823:+:1874340..1877374

Molecular Weight (calculated)

72743.4 Da

IEP (calculated)

5.335

GRAVY (calculated)

-0.326

Length

681 amino acids

Sequence
(BLAST)

001: MATAALLRSI RRRDVASAPF SAYKCIQSSG KASLNGQNWR SFSRVFSSKP AGNDVIGIDL GTTNSCVAVM EGKNPKVIEN AEGARTTPSV VAFNPKGELL
101: VGTPAKRQAV TNPTNTLFGT KRLIGRKFDD PQTQKEMKMV PYKIVRAPNG DAWVEANGQQ YSPSQVGAFV LTKMKETAEA YLGKSVKKAV VTVPAYFNDA
201: QRQATKDAGR IAGLDVERII NEPTAAALSY GMTNKEGLIA VFDLGGGTFD VSILEISNGV FEVKATNGDT FLGGEDFDNA LLDFLVNEFK TSEGIDLAKD
301: RLALQRLREA AEKAKIELSS TSQTEINLPF ITADASGAKH FNITLTRSKF EALVNGLIER TRDPCKNCLK DAGISAKEVD EVLLVGGMTR VPKVQTVVAE
401: IFGKTPSKGV NPDEAVAMGA ALQGGILRGD VKELLLLDVT PLSLGIETLG GVFTRLITRN TTIPTKKSQV FSTAADNQTQ VGIRVLQGER EMASDNKLLG
501: EFDLVGIPPS PRGIPQIEVT FDIDANGIVT VSAKDKTTGK EQQITIRSSG GLSEDDIQKM VRDAELHAQK DKERKDLIDT KNTADTTIYS IEKSLGEYRE
601: KIPSEVAKEI EDAVADLRTA SSGDDVNEIK AKIDAANKAV SKIGEHMSGG GGSGGDSTPG GGGAQGGSDQ TPEADYEEVK K

Best Arabidopsis Sequence Match ( AT5G09590.1 )
(BLAST)

001: MATAALLRSI RRREVVSSPF SAYRCLSSSG KASLNSSYLG QNFRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNTK
101: GELLVGTPAK RQAVTNPTNT VSGTKRLIGR KFDDPQTQKE MKMVPYKIVR APNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSV TKAVVTVPAY
201: FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV NEFKTTEGID
301: LAKDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSRFETLVNH LIERTRDPCK NCLKDAGISA KEVDEVLLVG GMTRVPKVQS
401: IVAEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL ITRNTTIPTK KSQVFSTAAD NQTQVGIRVL QGEREMATDN
501: KLLGEFDLVG IPPSPRGVPQ IEVTFDIDAN GIVTVSAKDK TTGKVQQITI RSSGGLSEDD IQKMVREAEL HAQKDKERKE LIDTKNTADT TIYSIEKSLG
601: EYREKIPSEI AKEIEDAVAD LRSASSGDDL NEIKAKIEAA NKAVSKIGEH MSGGSGGGSA PGGGSEGGSD QAPEAEYEEV KK

Arabidopsis Description

HSP70-10Heat shock 70 kDa protein 10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.