CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08914	Canola	cytosol	74.54	85.35
CDY34275	Canola	cytosol	74.96	85.28
CDY11007	Canola	cytosol	74.26	84.89
CDY24832	Canola	cytosol	74.54	84.8
CDY03462	Canola	plastid	84.25	84.13
CDX92631	Canola	plastid	82.56	82.91
AT4G24280.1	Thale cress	plastid	83.12	82.31
KRH26302	Soybean	plastid	31.5	81.16
VIT_17s0000g03310.t01	Wine grape	extracellular, plastid	78.34	78.78
KRH06058	Soybean	mitochondrion	76.09	78.52
GSMUA_Achr9P07750_001	Banana	plastid	70.75	78.23
PGSC0003DMT400064031	Potato	cytosol, plastid	77.22	77.76
KXG37805	Sorghum	plastid	74.54	77.71
Zm00001d013507_P001	Maize	plastid	74.54	77.6
Zm00001d033591_P001	Maize	plastid	74.12	77.16
TraesCS1D01G131800.1	Wheat	plastid	73.98	77.13
GSMUA_Achr6P28370_001	Banana	plastid	69.62	77.1
CDY03459	Canola	cytosol	71.59	76.89
VIT_18s0041g01230.t01	Wine grape	plastid	74.54	76.81
TraesCS1A01G133100.2	Wheat	golgi	73.84	76.75
TraesCS1B01G151300.1	Wheat	plastid	73.84	76.53
Os05t0303000-01	Rice	plastid	49.37	76.47
Solyc11g020040.1.1	Tomato	plastid	73.14	75.14
EES15917	Sorghum	plastid	73.98	74.93
Zm00001d023802_P001	Maize	plastid	73.56	74.4
TraesCS5D01G117600.1	Wheat	plastid	71.73	73.91
Zm00001d041119_P001	Maize	plastid	73.0	73.83
TraesCS5A01G106200.2	Wheat	plastid	71.59	73.77
TraesCS5B01G111200.1	Wheat	golgi, plastid	71.59	73.77
Os12t0244100-01	Rice	plastid	72.01	73.35
HORVU5Hr1G032650.1	Barley	plastid	71.31	73.27
KRH26303	Soybean	cytosol, endoplasmic reticulum	27.0	71.91
HORVU1Hr1G030790.1	Barley	plastid	74.12	67.56
CDX90397	Canola	mitochondrion	48.1	50.44
CDX85810	Canola	mitochondrion	48.24	50.44
CDY49682	Canola	mitochondrion	48.24	50.37
CDY56552	Canola	mitochondrion	48.1	50.22
CDX81132	Canola	mitochondrion	48.1	50.22
CDX75683	Canola	mitochondrion	47.54	49.56
CDX69342	Canola	mitochondrion	47.12	49.26
CDY22648	Canola	cytosol	38.54	45.29
CDY35063	Canola	cytosol	32.91	45.17
CDY33359	Canola	cytosol	32.91	45.17
CDX67525	Canola	endoplasmic reticulum	36.43	44.89
CDY52661	Canola	cytosol	40.65	44.67
CDY50531	Canola	cytosol	40.79	44.62
CDY00784	Canola	cytosol	40.51	44.31
CDX73815	Canola	cytosol	40.51	44.17
CDX96825	Canola	cytosol	40.23	44.0
CDX83960	Canola	cytosol	40.08	43.85
CDY23972	Canola	endoplasmic reticulum	39.52	43.77
CDX77423	Canola	cytosol, endoplasmic reticulum	39.52	43.77
CDX79726	Canola	endoplasmic reticulum	39.52	43.77
CDX84809	Canola	endoplasmic reticulum	39.52	43.77
CDY63497	Canola	endoplasmic reticulum	39.52	43.77
CDY13371	Canola	cytosol, endoplasmic reticulum	41.35	43.69
CDY46766	Canola	endoplasmic reticulum	39.38	43.61
CDY44807	Canola	mitochondrion	47.54	42.78
CDY06347	Canola	endoplasmic reticulum	38.54	42.68
CDY40362	Canola	cytosol, mitochondrion	26.02	40.75
GSMUA_Achr6P12370_001	Banana	plastid	71.73	39.02
CDY49668	Canola	cytosol	26.86	38.35
CDY49667	Canola	nucleus	2.11	20.0

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:A0A078EQI5
EnsemblPlants:CDY03461	ProteinID:CDY03461	ProteinID:CDY03461.1	InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00116115001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS
InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI0004EE788C	SEG:seg	:

Description

BnaC01g16210D

Coordinates

chrLK031943:-:580298..583265

Molecular Weight (calculated)

76469.4 Da

IEP (calculated)

5.115

GRAVY (calculated)

-0.332

Length

711 amino acids

Sequence
(BLAST)

001: MASSAAQIHA LGGIGIATYS SSSKSNLNVK GSYMPISGSC YFFGARNGPF TTPTSAFLRM SIRNGSRYAV GPVRVVNEKV VGIDLGTTNS AVAALEGGKP
101: TIVTNDEGQR TTPSVVAYTK SGDRLVGQSA KRQAVVNPEN TFSSVKRFIG SRMDEVAEES KQVSYRVVKD ENENVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASSFLDEK VTKAVITVPA YFNDSQRTAT KDAGRIAGLD VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVSEGVFQVL STCGDTHLGG
301: DDFDKRVVDW LASNFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSTQTQT NISLPFITAT ADGPKHIETT LTRTKFKELC SDLLDRCKTP VENSLRDARL
401: KFKDIDEVIL VGGSTRIPAV QEVVRKLTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSNI VLLDVTPLSL GTNTTLRTDS VMSKIIPRNT TLPTSKSKVF
501: TTVDDGQTRV RFHVLQGERE FARDNKCLGS FLLDGIPPAP RGVPKIDVKF DIDANGILSA TATDRATGNK QEITITGSTT LSKDEVEKMV KEAERFAKDD
601: KQKREAIDTK NQADSVVYQT EKQLKEFGEK IPGEVKEKIE SKLQELEDKI GSGSTQEIKD SMAALNQEVM QIGQSMCNQA GPEAGAGAGA SSTDSSSSKG
701: GDDVIDADFT Q

Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Arabidopsis Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.