Factsheet for GSMUA_Achr6P28370_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P07750_001	Banana	plastid	92.68	92.53
Os05t0303000-01	Rice	plastid	59.81	83.66
Zm00001d013507_P001	Maize	plastid	86.92	81.7
KXG37805	Sorghum	plastid	86.76	81.67
Zm00001d033591_P001	Maize	plastid	86.6	81.41
KRH06058	Soybean	mitochondrion	87.23	81.28
Bra002461.1-P	Field mustard	cytosol	67.13	81.17
CDY11007	Canola	cytosol	78.5	81.03
CDY08914	Canola	cytosol	78.35	81.0
CDY24832	Canola	cytosol	78.66	80.8
CDY34275	Canola	cytosol	78.5	80.64
TraesCS1D01G131800.1	Wheat	plastid	85.51	80.5
TraesCS1A01G133100.2	Wheat	golgi	85.2	79.97
Solyc01g103450.2.1	Tomato	plastid	87.54	79.94
TraesCS1B01G151300.1	Wheat	plastid	85.36	79.88
PGSC0003DMT400064031	Potato	cytosol, plastid	87.38	79.46
VIT_18s0041g01230.t01	Wine grape	plastid	85.2	79.28
AT4G24280.1	Thale cress	plastid	85.98	76.88
CDX92631	Canola	plastid	84.42	76.55
Bra013786.1-P	Field mustard	plastid	84.74	76.51
Bra019231.1-P	Field mustard	plastid	84.58	76.48
Bra010498.1-P	Field mustard	plastid	85.2	76.29
AT5G49910.1	Thale cress	plastid	85.2	76.18
CDY03462	Canola	plastid	84.42	76.12
HORVU1Hr1G030790.1	Barley	plastid	85.36	70.26
CDY03461	Canola	plastid	77.1	69.62
CDY03459	Canola	cytosol	65.89	63.9
GSMUA_Achr3P12480_001	Banana	mitochondrion	48.29	50.74
GSMUA_Achr6P36350_001	Banana	mitochondrion	41.59	50.47
GSMUA_Achr4P19830_001	Banana	mitochondrion	52.34	49.34
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	44.24	47.25
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	44.7	47.05
GSMUA_Achr8P20830_001	Banana	cytosol, plasma membrane	44.86	44.44
GSMUA_Achr6P15270_001	Banana	cytosol	30.84	43.33
GSMUA_Achr10P...	Banana	cytosol	32.24	42.95
GSMUA_Achr4P11940_001	Banana	cytosol	47.82	42.52
GSMUA_Achr6P12370_001	Banana	plastid	85.83	42.16
GSMUA_Achr7P15160_001	Banana	cytosol	28.04	41.67
GSMUA_Achr9P03960_001	Banana	cytosol	31.62	39.73
GSMUA_Achr5P04580_001	Banana	endoplasmic reticulum	32.4	38.45
GSMUA_Achr5P10770_001	Banana	cytosol	37.54	32.66

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr6G28370_001
EnsemblPlants:GSMUA_Achr6P28370_001	EnsemblPlants:GSMUA_Achr6T28370_001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	UniProt:M0TAY2	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332	SUPFAM:SSF100920
SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI000296CFFE	SEG:seg	:	:

Description

Stromal 70 kDa heat shock-related protein, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G28370_001]

Coordinates

chr6:-:28734995..28742830

Molecular Weight (calculated)

68693.5 Da

IEP (calculated)

5.027

GRAVY (calculated)

-0.287

Length

642 amino acids

Sequence
(BLAST)

001: MATSSAQIHV LGSAAAFPPS KLPSSRVAAS NSLFFGLRRP SGFGRTRLSA RRRGHGSGYG PLRVVCEKVV GIDLGTTNSA VAAMEGGKPT IVTNAEGQRT
101: TPSVVAYTKN GDRLVGQIAK RQAVVNPENT FFSVKRDENG NVKLDCPAIG KQFAAEEISA QVLRKLVDDA SKFLNDKVTK AVVTVPAYFN DSQRTATKDA
201: GRIAGLEVLR IINEPTAASL AYGFEKKNNE TILVFDLGGG TFDVSVLEVG DGVFEVLSTS GDTHLGGDDF DKRIVDWLAA DFKRDEGIDL LKDKQALQRL
301: TETAEKAKME LSSLTQTNMS LPFITATADG PKHIETTLTR AKFEELCSDL LDRLRTPVEN ALKDAKLSFK DIDEIILVGG STRIPAVQEL VKKMTGKDPN
401: VTVNPDEVVA LGAAVQAGVL AGDVSDIVLL DVTPLSLGLE TLGGVMTKII PRNTTLPTSK SEVFSTAADG QTSVEINVLQ GEREFVRDNK SLGSFRLDGI
501: PPAPRGVPQI EVKFDIDANG ILSVTAVDKG TGKKQDITIT GASTLPSDEV DRMVKEAEKF AKEDKEKRDD IDTKNQSESV IYQTEKQLKE LGDKVPAEVK
601: EKVEAKLKDL KDAVAADAGS AGPSTKGPDN GDVIDADFTD SK

Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Arabidopsis Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.