Factsheet for Zm00001d013507_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22065420
plastid: 23198870
cytosol: 28250383

msms PMID: 28250383 doi

CN Meisrimler, F Buck, S Lüthje

University Hospital Eppendorf, Institute of Clinical Chemistry, Campus Science, Martinistraße 52, D-20246 Hamburg, Germany. buck@uke.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. c_m_2406@yahoo.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. s.luthje@botanik.uni-hamburg.de.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37805	Sorghum	plastid	98.24	98.39
Zm00001d033591_P001	Maize	plastid	98.24	98.24
Os05t0303000-01	Rice	plastid	64.28	95.64
TraesCS1D01G131800.1	Wheat	plastid	92.68	92.82
TraesCS1A01G133100.2	Wheat	golgi	92.39	92.25
TraesCS1B01G151300.1	Wheat	plastid	92.24	91.84
CDY34275	Canola	cytosol	80.38	87.84
CDY11007	Canola	cytosol	79.94	87.78
CDY08914	Canola	cytosol	79.65	87.6
KRH06058	Soybean	mitochondrion	88.14	87.37
CDY24832	Canola	cytosol	79.94	87.36
GSMUA_Achr6P28370_001	Banana	plastid	81.7	86.92
GSMUA_Achr9P07750_001	Banana	plastid	81.55	86.63
Bra002461.1-P	Field mustard	cytosol	66.62	85.69
Solyc01g103450.2.1	Tomato	plastid	86.82	84.35
VIT_18s0041g01230.t01	Wine grape	plastid	84.92	84.06
PGSC0003DMT400064031	Potato	cytosol, plastid	86.82	83.99
Zm00001d023802_P001	Maize	plastid	84.63	82.22
Zm00001d041119_P001	Maize	plastid	84.63	82.22
Bra013786.1-P	Field mustard	plastid	84.92	81.58
CDX92631	Canola	plastid	84.33	81.36
AT4G24280.1	Thale cress	plastid	85.51	81.34
Bra019231.1-P	Field mustard	plastid	84.48	81.27
AT5G49910.1	Thale cress	plastid	85.36	81.2
CDY03462	Canola	plastid	84.48	81.04
HORVU1Hr1G030790.1	Barley	plastid	92.53	81.03
Bra010498.1-P	Field mustard	plastid	84.48	80.47
CDY03461	Canola	plastid	77.6	74.54
CDY03459	Canola	cytosol	65.01	67.07
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	51.68	52.06
Zm00001d013842_P003	Maize	mitochondrion	51.39	51.77
Zm00001d006036_P001	Maize	mitochondrion	51.1	51.25
Zm00001d041550_P005	Maize	cytosol	45.1	47.46
Zm00001d054043_P007	Maize	endoplasmic reticulum	45.97	47.36
Zm00001d042922_P002	Maize	cytosol	44.8	47.22
Zm00001d014993_P001	Maize	endoplasmic reticulum	45.83	47.21
Zm00001d030725_P003	Maize	plasma membrane	44.8	47.15
Zm00001d012420_P001	Maize	plasma membrane	44.66	47.07
Zm00001d047799_P002	Maize	cytosol, extracellular, plasma membrane, plastid	44.8	46.93
Zm00001d010529_P001	Maize	cytosol	44.07	46.38
Zm00001d028630_P005	Maize	cytosol, extracellular, nucleus, plasma membrane, plastid	43.92	46.23
Zm00001d028639_P001	Maize	cytosol	36.46	46.11
Zm00001d048687_P002	Maize	cytosol, extracellular, plasma membrane	34.55	45.83
GSMUA_Achr6P12370_001	Banana	plastid	81.26	42.46

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:103625973	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10
UniProt:A0A1D6GK64	ProteinID:AQK63737.1	InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329
ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067
TIGRFAMs:TIGR02350	UniParc:UPI00022157CD	EnsemblPlantsGene:Zm00001d013507	EnsemblPlants:Zm00001d013507_P001	EnsemblPlants:Zm00001d013507_T001	SEG:seg

Description

Heat shock 70 kDa protein 6 chloroplastic

Coordinates

chr5:-:12959336..12964908

Molecular Weight (calculated)

73234.6 Da

IEP (calculated)

4.864

GRAVY (calculated)

-0.329

Length

683 amino acids

Sequence
(BLAST)

001: MATTTFPTST PFFAAHHGPR RSRPSISAAV YSRSRRWRPL RVACEKVVGI DLGTTNSAVA AMEGGKPTIV TNAEGARTTP SVVAYTKSGD RLVGQIAKRQ
101: AVVNPENTFF SVKRFIGRKM NEVDEESKQV SYRVIRDDNG NVKLDCPAIG KQFAAEEISA QVLRKLVDDA SKFLNDKVTK AVITVPAYFN DSQRTATKDA
201: GRIAGLEVLR IINEPTAASL AYGFEKKNNE TILVFDLGGG TFDVSVLEVG DGVFEVLSTS GDTHLGGDDF DKRIVDWLAG NFKNDEGIDL LKDKQALQRL
301: TEAAEKAKME LSSLTQTNIS LPFITATADG PKHIETTLTR AKFEELCSDL LDRLRTPVDN ALRDAKLQFK DIDEVILVGG STRIPAVQEL VKKMTGKDPN
401: VTVNPDEVVA LGAAVQAGVL SGDVSDIVLL DVTPLSLGLE TLGGVMTKII PRNTTLPTSK SEVFSTAADG QTSVEINVLQ GEREFVRDNK SLGSFRLDGI
501: PPAPRGVPQI EVKFDIDANG ILSVTAVDKG TGKKQDITIT GASTLPKDEV ERMVDEAEKF AKEDKEKRDA IDTKNQAESV IYQTEKQLKE LGDKVPGDVK
601: GKVESKLQEL KDAVAGGSTQ TMKDAISALN QEVMQIGQSL YSQQGAPGAG PGPADASAGS AAGTSEKPGD DGDVIDADFT DSK

Best Arabidopsis Sequence Match ( AT5G49910.1 )
(BLAST)

001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN

Arabidopsis Description

HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.