Factsheet for Zm00001d030725_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23353019
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
cytosol: 28250383

msms PMID: 28250383 doi

CN Meisrimler, F Buck, S Lüthje

University Hospital Eppendorf, Institute of Clinical Chemistry, Campus Science, Martinistraße 52, D-20246 Hamburg, Germany. buck@uke.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. c_m_2406@yahoo.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. s.luthje@botanik.uni-hamburg.de.

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16191	Sorghum	cytosol	99.08	99.08
Zm00001d041550_P005	Maize	cytosol	98.61	98.61
Os11t0703900-01	Rice	extracellular, plasma membrane	96.15	96.15
TraesCS4D01G140800.1	Wheat	cytosol, nucleus	95.07	95.22
TraesCS4A01G175100.1	Wheat	cytosol	81.2	94.78
VIT_06s0004g04510.t01	Wine grape	cytosol, extracellular	94.3	94.44
PGSC0003DMT400023039	Potato	cytosol, extracellular	93.22	93.22
Solyc09g010630.2.1	Tomato	extracellular	93.22	93.22
KRH19702	Soybean	endoplasmic reticulum	90.45	92.88
Zm00001d042922_P002	Maize	cytosol	92.6	92.75
VIT_13s0019g01430.t01	Wine grape	cytosol	92.6	92.46
Zm00001d012420_P001	Maize	plasma membrane	92.3	92.44
Zm00001d010529_P001	Maize	cytosol	92.14	92.14
GSMUA_Achr7P15160_001	Banana	cytosol	61.33	92.13
TraesCS4B01G142400.1	Wheat	cytosol	94.92	92.08
KRH67530	Soybean	endoplasmic reticulum, nucleus	92.45	91.88
KRG95806	Soybean	nucleus	92.14	91.44
Zm00001d028630_P005	Maize	cytosol, extracellular, nucleus, plasma membrane, plastid	91.06	91.06
Zm00001d047799_P002	Maize	cytosol, extracellular, plasma membrane, plastid	89.06	88.65
Zm00001d048687_P002	Maize	cytosol, extracellular, plasma membrane	60.25	75.92
Zm00001d028639_P001	Maize	cytosol	55.32	66.48
Zm00001d054043_P007	Maize	endoplasmic reticulum	62.4	61.09
Zm00001d014993_P001	Maize	endoplasmic reticulum	62.25	60.94
Zm00001d013507_P001	Maize	plastid	47.15	44.8
Zm00001d013842_P003	Maize	mitochondrion	46.69	44.69
Zm00001d033591_P001	Maize	plastid	47.0	44.66
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	45.92	43.95
Zm00001d006036_P001	Maize	mitochondrion	45.92	43.76
Zm00001d023802_P001	Maize	plastid	46.53	42.96
Zm00001d041119_P001	Maize	plastid	46.38	42.82

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:103639924	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	UniProt:A0A1D6KE29	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	ProteinID:ONM01426.1	ProteinID:ONM01427.1	ProteinID:ONM01429.1	ProteinID:ONM01430.1	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF327
SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI000189D313	EnsemblPlantsGene:Zm00001d030725	EnsemblPlants:Zm00001d030725_P003
EnsemblPlants:Zm00001d030725_T003	SEG:seg	:	:	:	:

Description

Heat shock protein 70

Coordinates

chr1:+:155959520..155963384

Molecular Weight (calculated)

71096.5 Da

IEP (calculated)

4.872

GRAVY (calculated)

-0.410

Length

649 amino acids

Sequence
(BLAST)

001: MAGKGDGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FSDASVQSDI KLWPFKVIPG
101: PGEKPMIVVQ HKGEEKQFAA EEISSMVLIK MREIAEAYLG STIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIT GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLYEGIDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSSVHDV VLVGGSTRIP RVQQLLQDFF NGKELCKNIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERTRTRDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQDAEK YKSEDEEHKK KVESKNSLEN YAYNMRNTIK DEKIASKLAA DDKKKIEDAI DAAISWLDAN QLAEADEFDD
601: KMKELESLCN PIIAKMYQGA GADMGGSGGM DEDAPAGSGG PGPKIEEVD

Best Arabidopsis Sequence Match ( AT3G12580.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR YSDPSVQADK SHWPFKVVSG
101: PGEKPMIVVN HKGEEKQFSA EEISSMVLIK MREIAEAFLG SPVKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIT GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSSVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVDAKNALEN YAYNMRNTIK DEKIASKLDA ADKKKIEDAI DQAIEWLDGN QLAEADEFED
601: KMKELESLCN PIIARMYQGA GPDMGGAGGM DDDTPAGGSG GAGPKIEEVD

Arabidopsis Description

MED37CProbable mediator of RNA polymerase II transcription subunit 37c [Source:UniProtKB/Swiss-Prot;Acc:Q9LHA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.