Factsheet for TraesCS4D01G140800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 26579155

msms PMID: 26579155 doi

T Bonnot, E Bancel, C Chambon, J Boudet, G Branlard, P Martre

Metabolism Exploration Platform Proteomic Component, Institut National de la Recherche Agronomique Saint-Genès Champanelle, France., UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Institut National de la Recherche Agronomique Clermont-Ferrand, France ; UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Blaise Pascal University Aubière, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G175100.1	Wheat	cytosol	84.1	98.02
Os11t0703900-01	Rice	extracellular, plasma membrane	97.22	97.07
TraesCS4B01G142400.1	Wheat	cytosol	99.54	96.41
Zm00001d030725_P003	Maize	plasma membrane	95.22	95.07
EES16191	Sorghum	cytosol	94.91	94.76
Zm00001d041550_P005	Maize	cytosol	94.75	94.61
VIT_06s0004g04510.t01	Wine grape	cytosol, extracellular	94.44	94.44
TraesCS6D01G317700.1	Wheat	cytosol	93.98	94.13
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	93.83	93.97
TraesCS5D01G492900.2	Wheat	cytosol	93.06	93.06
Solyc09g010630.2.1	Tomato	extracellular	93.06	92.91
KRH19702	Soybean	endoplasmic reticulum	90.43	92.72
PGSC0003DMT400023039	Potato	cytosol, extracellular	92.75	92.6
GSMUA_Achr7P15160_001	Banana	cytosol	61.73	92.59
TraesCS4D01G207500.1	Wheat	cytosol	92.9	92.47
TraesCS1D01G284000.2	Wheat	cytosol, golgi	92.13	92.13
TraesCS3D01G352400.2	Wheat	cytosol, golgi	91.98	92.12
TraesCS3D01G351900.1	Wheat	cytosol	92.59	92.02
KRH67530	Soybean	endoplasmic reticulum, nucleus	92.59	91.88
VIT_13s0019g01430.t01	Wine grape	cytosol	92.13	91.85
KRG95806	Soybean	nucleus	92.59	91.74
TraesCS4D01G206600.1	Wheat	cytosol	90.59	89.35
TraesCS6D01G402500.1	Wheat	cytosol	59.1	73.94
TraesCS6D01G322700.1	Wheat	cytosol	48.77	70.38
TraesCS4D01G207100.1	Wheat	cytosol	52.16	69.4
TraesCS6D01G322800.1	Wheat	cytosol	51.7	65.3
TraesCS6D01G049100.1	Wheat	golgi	62.5	60.9
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	56.02	59.7
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	59.57	58.48
TraesCS6D01G339700.1	Wheat	cytosol	54.01	58.24
TraesCS2D01G600900.1	Wheat	endoplasmic reticulum	56.64	54.94
TraesCS1D01G452500.1	Wheat	cytosol	43.98	54.91
TraesCS3D01G262800.1	Wheat	cytosol	50.46	53.26
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	46.91	45.04
TraesCS1D01G131800.1	Wheat	plastid	47.07	44.72
TraesCS3D01G296700.1	Wheat	golgi	46.91	44.51
TraesCS5D01G276100.1	Wheat	mitochondrion	46.45	44.01
TraesCS5D01G117600.1	Wheat	plastid	46.6	43.77
TraesCS6D01G339800.1	Wheat	nucleus	50.15	40.98
TraesCS6D01G339600.1	Wheat	cytosol	56.79	39.66

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
ncoils:Coil	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF323	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS4D01G140800
EnsemblPlants:TraesCS4D01G140800.1	TIGR:cd10233	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:-:124259745..124263243

Molecular Weight (calculated)

71117.6 Da

IEP (calculated)

4.801

GRAVY (calculated)

-0.417

Length

648 amino acids

Sequence
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR VSDPSVQSDM KLWPFKVIAG
101: PGDKPMIVVQ YKGEEKEFAA EEISSMVLIK MREIAEAYLG STIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKSTAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLYEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP RVQQLLQDFF NGKELCKNIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERTRTRDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVESKNALEN YAYNMRNTIK DDKIASKLAA DDKKKIEDAI DQAIQWLDGN QLAEADEFDD
601: KMKELEGLCN PIIAKMYQGA GANMAGGMDE DDAPPAAGGA GPKIEEVD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.