Factsheet for TraesCS1D01G131800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G133100.2	Wheat	golgi	99.56	99.27
TraesCS1B01G151300.1	Wheat	plastid	99.27	98.69
Os05t0303000-01	Rice	plastid	63.34	94.12
KXG37805	Sorghum	plastid	92.82	92.82
Zm00001d013507_P001	Maize	plastid	92.82	92.68
Zm00001d033591_P001	Maize	plastid	92.38	92.24
CDY08914	Canola	cytosol	79.03	86.8
KRH06058	Soybean	mitochondrion	87.68	86.79
CDY34275	Canola	cytosol	79.47	86.72
CDY11007	Canola	cytosol	79.03	86.66
CDY24832	Canola	cytosol	79.18	86.4
HORVU1Hr1G030790.1	Barley	plastid	98.68	86.28
GSMUA_Achr9P07750_001	Banana	plastid	80.94	85.85
GSMUA_Achr6P28370_001	Banana	plastid	80.5	85.51
Bra002461.1-P	Field mustard	cytosol	66.13	84.93
Solyc01g103450.2.1	Tomato	plastid	86.22	83.64
PGSC0003DMT400064031	Potato	cytosol, plastid	86.07	83.14
TraesCS5D01G117600.1	Wheat	plastid	83.87	82.9
VIT_18s0041g01230.t01	Wine grape	plastid	83.14	82.17
AT5G49910.1	Thale cress	plastid	85.34	81.06
AT4G24280.1	Thale cress	plastid	85.19	80.92
CDX92631	Canola	plastid	83.72	80.65
Bra013786.1-P	Field mustard	plastid	83.72	80.31
Bra019231.1-P	Field mustard	plastid	83.58	80.28
Bra010498.1-P	Field mustard	plastid	83.87	79.78
CDY03462	Canola	plastid	83.28	79.78
CDY03461	Canola	plastid	77.13	73.98
CDY03459	Canola	cytosol	64.52	66.47
TraesCS5D01G276100.1	Wheat	mitochondrion	51.91	51.75
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	51.17	51.7
TraesCS3D01G296700.1	Wheat	golgi	50.44	50.37
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	42.23	47.37
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	44.87	47.3
TraesCS6D01G317700.1	Wheat	cytosol	44.72	47.14
TraesCS4D01G140800.1	Wheat	cytosol, nucleus	44.72	47.07
TraesCS6D01G049100.1	Wheat	golgi	45.89	47.07
TraesCS1D01G284000.2	Wheat	cytosol, golgi	44.57	46.91
TraesCS5D01G492900.2	Wheat	cytosol	44.13	46.45
TraesCS4D01G207500.1	Wheat	cytosol	43.99	46.08
TraesCS4D01G206600.1	Wheat	cytosol	44.28	45.97
TraesCS3D01G352400.2	Wheat	cytosol, golgi	43.55	45.9
TraesCS3D01G351900.1	Wheat	cytosol	43.55	45.55
TraesCS6D01G402500.1	Wheat	cytosol	34.31	45.17
TraesCS1D01G452500.1	Wheat	cytosol	34.02	44.7
TraesCS6D01G322800.1	Wheat	cytosol	33.58	44.64
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	42.96	44.39
TraesCS6D01G322700.1	Wheat	cytosol	28.15	42.76
TraesCS2D01G600900.1	Wheat	endoplasmic reticulum	41.79	42.66
GSMUA_Achr6P12370_001	Banana	plastid	81.08	42.31
TraesCS4D01G207100.1	Wheat	cytosol	29.62	41.48
TraesCS6D01G339700.1	Wheat	cytosol	36.22	41.1
TraesCS3D01G262800.1	Wheat	cytosol	32.84	36.48
TraesCS6D01G339800.1	Wheat	nucleus	33.87	29.13
TraesCS6D01G339600.1	Wheat	cytosol	35.92	26.4

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Chaperone_DnaK
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332
SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	EnsemblPlantsGene:TraesCS1D01G131800	EnsemblPlants:TraesCS1D01G131800.1
TIGR:cd10234	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:155728817..155734791

Molecular Weight (calculated)

72982.4 Da

IEP (calculated)

4.790

GRAVY (calculated)

-0.302

Length

682 amino acids

Sequence
(BLAST)

001: MATTTFPTST PFFVHHGARR PSVNLRTAAV VYGRGGRRWR PLRVACEKVV GIDLGTTNSA VAAMEGGKPT IVTNAEGART TPSVVAYTKA GDRLVGQIAK
101: RQAVVNPENT FFSVKRFIGR KMNEVAEESK QVSYRLVRDD NGNVKLDCPA IGKQFAAEEI SAQVLRKLVD DASKFLNDKV TKAVITVPAY FNDSQRTATK
201: DAGRIAGLDV LRIINEPTAA SLAYGFEKKN NETILVFDLG GGTFDVSVLE VGDGVFEVLS TSGDTHLGGD DFDKRIVDWL AGSFKNDEGI DLLKDKQALQ
301: RLTEAAEKAK MELSSLTQTN ISLPFITATA DGPKHIETTL TRGKFEELCS DLLDRLRTPV DNSLRDAKLS LKEIDEVILV GGSTRIPAVQ DLVKKMTGKD
401: PNVTVNPDEV VALGAAVQAG VLSGDVSDIV LLDVTPLSLG LETLGGVMTK IIPRNTTLPT SKSEVFSTAA DGQTSVEINV LQGEREFVRD NKSLGSFRLD
501: GIPPAPRGVP QIEVKFDIDA NGILSVAAVD KGTGKKQDIT ITGASTLPKD EVEKMVEEAE KFAAEDKEKR DAIDTKNQAE SVIYQTEKQL KELGDKVPGD
601: VKEKVEGKLK ELQDAVAGGS TQTIKDALAA LNQEVMQLGQ SLYQQQGSGP TPGADGAADS TGPSEKTGDG GDVIDADFTD SN

Best Arabidopsis Sequence Match ( AT5G49910.1 )
(BLAST)

001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN

Arabidopsis Description

HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.