Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
extracellular: 22364583 plastid: 22908117 plastid: 28183294 nucleus: 28394025 endoplasmic reticulum: 29145071 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
29145071
doi
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
msms PMID:
22364583
doi
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
msms PMID:
28183294
doi
Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400064031 | Potato | cytosol, plastid | 99.29 | 98.87 |
KRH06058 | Soybean | mitochondrion | 88.62 | 90.42 |
VIT_17s0000g03310.t01 | Wine grape | extracellular, plastid | 90.33 | 89.82 |
Os05t0303000-01 | Rice | plastid | 57.89 | 88.67 |
GSMUA_Achr6P28370_001 | Banana | plastid | 79.94 | 87.54 |
GSMUA_Achr9P07750_001 | Banana | plastid | 79.94 | 87.4 |
Zm00001d013507_P001 | Maize | plastid | 84.35 | 86.82 |
KXG37805 | Sorghum | plastid | 84.07 | 86.66 |
TraesCS1D01G131800.1 | Wheat | plastid | 83.64 | 86.22 |
Zm00001d033591_P001 | Maize | plastid | 83.64 | 86.09 |
TraesCS1A01G133100.2 | Wheat | golgi | 83.5 | 85.82 |
TraesCS1B01G151300.1 | Wheat | plastid | 83.5 | 85.57 |
Solyc11g020040.1.1 | Tomato | plastid | 81.37 | 82.66 |
HORVU1Hr1G030790.1 | Barley | plastid | 83.07 | 74.87 |
Solyc01g106260.2.1 | Tomato | plastid | 49.22 | 51.64 |
Solyc01g106210.2.1 | Tomato | plastid | 48.36 | 49.93 |
Solyc06g076020.2.1 | Tomato | cytosol, nucleus, plastid, unclear | 43.67 | 47.38 |
Solyc10g086410.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus, unclear | 43.24 | 47.2 |
Solyc09g010630.2.1 | Tomato | extracellular | 43.53 | 47.15 |
Solyc07g005820.2.1 | Tomato | cytosol | 43.67 | 46.94 |
Solyc04g011440.2.1 | Tomato | cytosol, extracellular, nucleus, plastid, unclear | 43.39 | 46.85 |
Solyc08g082820.2.1 | Tomato | extracellular | 44.24 | 46.7 |
Solyc06g052050.2.1 | Tomato | endoplasmic reticulum, nucleus, unclear | 41.11 | 46.69 |
Solyc03g082920.2.1 | Tomato | nucleus, plastid | 43.95 | 46.33 |
Solyc11g066100.1.1 | Tomato | cytosol, unclear | 42.82 | 46.02 |
Solyc03g117630.1.1 | Tomato | cytosol | 41.82 | 44.95 |
Solyc01g099660.2.1 | Tomato | extracellular | 42.53 | 44.69 |
Solyc11g066060.1.1 | Tomato | extracellular, nucleus, unclear | 43.24 | 43.55 |
GSMUA_Achr6P12370_001 | Banana | plastid | 79.37 | 42.69 |
Protein Annotations
Gene3D:1.20.1270.10 | MapMan:19.1.4.1 | Gene3D:2.60.34.10 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | InterPro:Chaperone_DnaK |
ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP70_C_sf | InterPro:HSP70_peptide-bd_sf |
InterPro:Heat_shock_70_CS | InterPro:Hsp_70_fam | InterPro:IPR029047 | InterPro:IPR029048 | UniProt:K4B1S1 | HAMAP:MF_00332 |
PFAM:PF00012 | PRINTS:PR00301 | ScanProsite:PS00297 | ScanProsite:PS00329 | ScanProsite:PS01036 | PANTHER:PTHR19375 |
PANTHER:PTHR19375:SF332 | SUPFAM:SSF100920 | SUPFAM:SSF100934 | SUPFAM:SSF53067 | EnsemblPlantsGene:Solyc01g103450.2 | EnsemblPlants:Solyc01g103450.2.1 |
TIGRFAMs:TIGR02350 | UniParc:UPI00027683FB | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1:+:92060728..92065237
Molecular Weight (calculated)
74900.7 Da
IEP (calculated)
4.946
GRAVY (calculated)
-0.312
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSTAQIHA LGATYFANSS SSTRKPLKSV FLGQKLNNRT LAFGLKQKKS RGNNGGYAPM RVVAEKVVGI DLGTTNSAVA AMEGGKPTIV TNAEGQRTTP
101: SVVAYTKSGD RLVGQIAKRQ AVVNPENTFF SVKRFIGRKM NEVDEESKQV SYNVIRDENG NVKLDCPAIG KSFAAEEISA QVLRKLVDDA SKFLNDKVSK
201: AVVTVPAYFN DSQRTATKDA GRIAGLEVLR IINEPTAASL AYGFEKKSNE TILVFDLGGG TFDVSVLEVG DGVFEVLSTS GDTHLGGDDF DKRIVDWLAA
301: SFKRDEGIDL LKDKQALQRL TETAEKAKME LSSLTQTNIS LPFITATADG PKHIETTITR GKFEELCSDL LDRLKTPVQN SLRDAKLSFS DIDEVILVGG
401: STRIPAVQEL VKKLTGKDPN VTVNPDEVVA LGAAVQAGVL AGDVSDIVLL DVTPLSIGLE TLGGVMTKII PRNTTLPTSK SEVFSTAADG QTSVEINVLQ
501: GEREFVRDNK SLGSFRLDGI PPAPRGVPQI EVKFDIDANG ILSVTAIDKG TGKKQDITIT GASTLPGDEV ERMVKEAERF AQEDKEKRDA IDTKNQADSV
601: VYQTEKQLKE LGDKVPGPVK EKVEAKLGEL KEAISGGSTQ TMKDAMAALN QEVMQLGQSL YNQPGAAPGA GPAPGGADGP SESSSGKGPD GNDVIDADFT
701: DSK
101: SVVAYTKSGD RLVGQIAKRQ AVVNPENTFF SVKRFIGRKM NEVDEESKQV SYNVIRDENG NVKLDCPAIG KSFAAEEISA QVLRKLVDDA SKFLNDKVSK
201: AVVTVPAYFN DSQRTATKDA GRIAGLEVLR IINEPTAASL AYGFEKKSNE TILVFDLGGG TFDVSVLEVG DGVFEVLSTS GDTHLGGDDF DKRIVDWLAA
301: SFKRDEGIDL LKDKQALQRL TETAEKAKME LSSLTQTNIS LPFITATADG PKHIETTITR GKFEELCSDL LDRLKTPVQN SLRDAKLSFS DIDEVILVGG
401: STRIPAVQEL VKKLTGKDPN VTVNPDEVVA LGAAVQAGVL AGDVSDIVLL DVTPLSIGLE TLGGVMTKII PRNTTLPTSK SEVFSTAADG QTSVEINVLQ
501: GEREFVRDNK SLGSFRLDGI PPAPRGVPQI EVKFDIDANG ILSVTAIDKG TGKKQDITIT GASTLPGDEV ERMVKEAERF AQEDKEKRDA IDTKNQADSV
601: VYQTEKQLKE LGDKVPGPVK EKVEAKLGEL KEAISGGSTQ TMKDAMAALN QEVMQLGQSL YNQPGAAPGA GPAPGGADGP SESSSGKGPD GNDVIDADFT
701: DSK
001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN
Arabidopsis Description
HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.