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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 11
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
plastid: 20363867
extracellular: 22364583
plastid: 22908117
plastid: 28183294
nucleus: 28394025
endoplasmic reticulum: 29145071
extracellular: 29876421
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID: 20363867 doi
C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 29145071 doi
P Ibort, H Imai, M Uemura, R Aroca
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
msms PMID: 22364583 doi
P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
msms PMID: 28183294 doi
R Tamburino, M Vitale, A Ruggiero, M Sassi, L Sannino, S Arena, A Costa, G Batelli, N Zambrano, A Scaloni, S Grillo, N Scotti
Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400064031 Potato cytosol, plastid 99.29 98.87
KRH06058 Soybean mitochondrion 88.62 90.42
VIT_17s0000g03310.t01 Wine grape extracellular, plastid 90.33 89.82
Os05t0303000-01 Rice plastid 57.89 88.67
GSMUA_Achr6P28370_001 Banana plastid 79.94 87.54
GSMUA_Achr9P07750_001 Banana plastid 79.94 87.4
Zm00001d013507_P001 Maize plastid 84.35 86.82
KXG37805 Sorghum plastid 84.07 86.66
TraesCS1D01G131800.1 Wheat plastid 83.64 86.22
Zm00001d033591_P001 Maize plastid 83.64 86.09
TraesCS1A01G133100.2 Wheat golgi 83.5 85.82
TraesCS1B01G151300.1 Wheat plastid 83.5 85.57
Solyc11g020040.1.1 Tomato plastid 81.37 82.66
HORVU1Hr1G030790.1 Barley plastid 83.07 74.87
Solyc01g106260.2.1 Tomato plastid 49.22 51.64
Solyc01g106210.2.1 Tomato plastid 48.36 49.93
Solyc06g076020.2.1 Tomato cytosol, nucleus, plastid, unclear 43.67 47.38
Solyc10g086410.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, nucleus, unclear 43.24 47.2
Solyc09g010630.2.1 Tomato extracellular 43.53 47.15
Solyc07g005820.2.1 Tomato cytosol 43.67 46.94
Solyc04g011440.2.1 Tomato cytosol, extracellular, nucleus, plastid, unclear 43.39 46.85
Solyc08g082820.2.1 Tomato extracellular 44.24 46.7
Solyc06g052050.2.1 Tomato endoplasmic reticulum, nucleus, unclear 41.11 46.69
Solyc03g082920.2.1 Tomato nucleus, plastid 43.95 46.33
Solyc11g066100.1.1 Tomato cytosol, unclear 42.82 46.02
Solyc03g117630.1.1 Tomato cytosol 41.82 44.95
Solyc01g099660.2.1 Tomato extracellular 42.53 44.69
Solyc11g066060.1.1 Tomato extracellular, nucleus, unclear 43.24 43.55
GSMUA_Achr6P12370_001 Banana plastid 79.37 42.69
Protein Annotations
Gene3D:1.20.1270.10MapMan:19.1.4.1Gene3D:2.60.34.10Gene3D:3.30.420.40Gene3D:3.90.640.10InterPro:Chaperone_DnaK
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0006457GO:GO:0008150GO:GO:0009987GO:GO:0051082InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CSInterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048UniProt:K4B1S1HAMAP:MF_00332
PFAM:PF00012PRINTS:PR00301ScanProsite:PS00297ScanProsite:PS00329ScanProsite:PS01036PANTHER:PTHR19375
PANTHER:PTHR19375:SF332SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067EnsemblPlantsGene:Solyc01g103450.2EnsemblPlants:Solyc01g103450.2.1
TIGRFAMs:TIGR02350UniParc:UPI00027683FBSEG:seg:::
Description
No Description!
Coordinates
chr1:+:92060728..92065237
Molecular Weight (calculated)
74900.7 Da
IEP (calculated)
4.946
GRAVY (calculated)
-0.312
Length
703 amino acids
Sequence
(BLAST)
001: MASSTAQIHA LGATYFANSS SSTRKPLKSV FLGQKLNNRT LAFGLKQKKS RGNNGGYAPM RVVAEKVVGI DLGTTNSAVA AMEGGKPTIV TNAEGQRTTP
101: SVVAYTKSGD RLVGQIAKRQ AVVNPENTFF SVKRFIGRKM NEVDEESKQV SYNVIRDENG NVKLDCPAIG KSFAAEEISA QVLRKLVDDA SKFLNDKVSK
201: AVVTVPAYFN DSQRTATKDA GRIAGLEVLR IINEPTAASL AYGFEKKSNE TILVFDLGGG TFDVSVLEVG DGVFEVLSTS GDTHLGGDDF DKRIVDWLAA
301: SFKRDEGIDL LKDKQALQRL TETAEKAKME LSSLTQTNIS LPFITATADG PKHIETTITR GKFEELCSDL LDRLKTPVQN SLRDAKLSFS DIDEVILVGG
401: STRIPAVQEL VKKLTGKDPN VTVNPDEVVA LGAAVQAGVL AGDVSDIVLL DVTPLSIGLE TLGGVMTKII PRNTTLPTSK SEVFSTAADG QTSVEINVLQ
501: GEREFVRDNK SLGSFRLDGI PPAPRGVPQI EVKFDIDANG ILSVTAIDKG TGKKQDITIT GASTLPGDEV ERMVKEAERF AQEDKEKRDA IDTKNQADSV
601: VYQTEKQLKE LGDKVPGPVK EKVEAKLGEL KEAISGGSTQ TMKDAMAALN QEVMQLGQSL YNQPGAAPGA GPAPGGADGP SESSSGKGPD GNDVIDADFT
701: DSK
Best Arabidopsis Sequence Match ( AT5G49910.1 )
(BLAST)
001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN
Arabidopsis Description
HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.