Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 10
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
20363867
extracellular: 20496099 nucleus: 25464976 plastid: 26371478 unclear: 26455813 nucleus: 28394025 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
20496099
doi
Institute for Plant Diseases and Plant Protection, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Str.2, 30419 Hannover, Germany. dahal@ipp.uni-hannover.de
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400031937 | Potato | extracellular | 98.8 | 98.65 |
KRH60086 | Soybean | endoplasmic reticulum | 94.14 | 93.86 |
VIT_02s0025g02140.t01 | Wine grape | endoplasmic reticulum | 93.69 | 93.55 |
KRH41370 | Soybean | endoplasmic reticulum | 92.94 | 92.8 |
Solyc03g082920.2.1 | Tomato | nucleus, plastid | 91.89 | 91.75 |
Solyc06g052050.2.1 | Tomato | endoplasmic reticulum, nucleus, unclear | 84.38 | 90.79 |
VIT_16s0098g01580.t01 | Wine grape | endoplasmic reticulum | 90.84 | 90.7 |
GSMUA_Achr9P23710_001 | Banana | endoplasmic reticulum | 82.88 | 90.49 |
GSMUA_Achr3P27250_001 | Banana | endoplasmic reticulum | 81.38 | 90.18 |
Zm00001d014993_P001 | Maize | endoplasmic reticulum | 89.34 | 89.74 |
Os02t0115900-02 | Rice | plasma membrane | 89.49 | 89.62 |
TraesCS6D01G049100.1 | Wheat | golgi | 89.49 | 89.62 |
TraesCS6B01G058300.1 | Wheat | endoplasmic reticulum | 89.49 | 89.62 |
TraesCS6A01G042600.1 | Wheat | golgi | 89.49 | 89.62 |
Zm00001d054043_P007 | Maize | endoplasmic reticulum | 89.19 | 89.59 |
KRH60091 | Soybean | nucleus | 93.69 | 89.02 |
KRH41372 | Soybean | endoplasmic reticulum | 92.94 | 87.43 |
KXG29291 | Sorghum | plasma membrane | 86.34 | 84.81 |
GSMUA_Achr4P11940_001 | Banana | cytosol | 90.84 | 83.8 |
Solyc01g099660.2.1 | Tomato | extracellular | 75.23 | 74.89 |
Solyc10g086410.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, nucleus, unclear | 62.31 | 64.44 |
Solyc04g011440.2.1 | Tomato | cytosol, extracellular, nucleus, plastid, unclear | 62.76 | 64.21 |
Solyc06g076020.2.1 | Tomato | cytosol, nucleus, plastid, unclear | 62.31 | 64.04 |
Solyc11g066100.1.1 | Tomato | cytosol, unclear | 62.76 | 63.91 |
Solyc09g010630.2.1 | Tomato | extracellular | 62.16 | 63.79 |
Solyc03g117630.1.1 | Tomato | cytosol | 62.01 | 63.15 |
GSMUA_Achr5P10770_001 | Banana | cytosol | 68.77 | 62.06 |
Solyc07g005820.2.1 | Tomato | cytosol | 60.81 | 61.93 |
Solyc11g066060.1.1 | Tomato | extracellular, nucleus, unclear | 62.31 | 59.46 |
Solyc01g106260.2.1 | Tomato | plastid | 48.5 | 48.21 |
Solyc01g106210.2.1 | Tomato | plastid | 49.1 | 48.02 |
Solyc11g020040.1.1 | Tomato | plastid | 47.9 | 46.1 |
Solyc01g103450.2.1 | Tomato | plastid | 46.7 | 44.24 |
Protein Annotations
Gene3D:1.20.1270.10 | Gene3D:2.60.34.10 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | MapMan:35.1 | ncoils:Coil |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005788 | InterPro:HSP70_C_sf | InterPro:HSP70_peptide-bd_sf |
InterPro:Heat_shock_70_CS | InterPro:Hsp_70_fam | InterPro:IPR029047 | InterPro:IPR029048 | UniProt:K4CPS8 | PFAM:PF00012 |
PRINTS:PR00301 | ScanProsite:PS00297 | ScanProsite:PS00329 | ScanProsite:PS01036 | PFscan:PS51257 | PANTHER:PTHR19375 |
PANTHER:PTHR19375:SF317 | SUPFAM:SSF100920 | SUPFAM:SSF100934 | SUPFAM:SSF53067 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc08g082820.2 |
EnsemblPlants:Solyc08g082820.2.1 | UniParc:UPI000276C8D6 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr8:+:65489311..65493585
Molecular Weight (calculated)
73205.1 Da
IEP (calculated)
4.831
GRAVY (calculated)
-0.449
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MAACSRRGNS LVVLAIVLLG CLSALSNAKE EATKLGTVIG IDLGTTYSCV GVYKNGHVEI IANDQGNRIT PSWVAFTDNE RLIGEAAKNL AAVNPERTIF
101: DVKRLIGRKF EDKEVQRDMK LVPYKIVSKD GKPYIQVKIK DGEVKVFSPE EISAMILTKM KETAEAFLGK TIKDAVVTVP AYFNDAQRQA TKDAGVIAGL
201: NVARIINEPT AAAIAYGLDK KGGEKNILVF DLGGGTFDVS ILTIDNGVFE VLATNGDTHL GGEDFDQRIM EYFIKLIKKK HGKDISKDNR ALGKLRREAE
301: RAKRSLSSQH QVRVEIESLF DGTDFSEPLT RARFEELNND LFRKTMGPVK KAMDDAGLQK NQIDEIVLVG GSTRIPKVQQ LLKDYFDGKE PSKGVNPDEA
401: VAYGAAVQGG ILSGEGGDET KDILLLDVAP LTLGIETVGG VMTKLIPRNT VIPTKKSQVF TTYQDQQTTV SIQVFEGERS LTKDCRNLGK FDLTGIPPAP
501: RGTPQIEVTF EVDANGILNV KAEDKGTGKA EKITITNDKG RLSQEEIERM VREAEEFAEE DKKVKEKIDA RNALETYVYN MKNQINDKDK LADKLESDEK
601: EKIETATKEA LEWLDDNQSA EKEDYDEKLK EVEAVCNPII TAVYQRSGGA PGGGASEEED DSHDEL
101: DVKRLIGRKF EDKEVQRDMK LVPYKIVSKD GKPYIQVKIK DGEVKVFSPE EISAMILTKM KETAEAFLGK TIKDAVVTVP AYFNDAQRQA TKDAGVIAGL
201: NVARIINEPT AAAIAYGLDK KGGEKNILVF DLGGGTFDVS ILTIDNGVFE VLATNGDTHL GGEDFDQRIM EYFIKLIKKK HGKDISKDNR ALGKLRREAE
301: RAKRSLSSQH QVRVEIESLF DGTDFSEPLT RARFEELNND LFRKTMGPVK KAMDDAGLQK NQIDEIVLVG GSTRIPKVQQ LLKDYFDGKE PSKGVNPDEA
401: VAYGAAVQGG ILSGEGGDET KDILLLDVAP LTLGIETVGG VMTKLIPRNT VIPTKKSQVF TTYQDQQTTV SIQVFEGERS LTKDCRNLGK FDLTGIPPAP
501: RGTPQIEVTF EVDANGILNV KAEDKGTGKA EKITITNDKG RLSQEEIERM VREAEEFAEE DKKVKEKIDA RNALETYVYN MKNQINDKDK LADKLESDEK
601: EKIETATKEA LEWLDDNQSA EKEDYDEKLK EVEAVCNPII TAVYQRSGGA PGGGASEEED DSHDEL
001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL
Arabidopsis Description
BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.