Factsheet for VIT_16s0098g01580.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
endoplasmic reticulum 9
extracellular 4
vacuole 4
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	93.25	93.25
KRH41370	Soybean	endoplasmic reticulum	91.3	91.3
KRH60086	Soybean	endoplasmic reticulum	91.3	91.17
Solyc08g082820.2.1	Tomato	extracellular	90.7	90.84
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	83.06	90.82
PGSC0003DMT400047710	Potato	endoplasmic reticulum	90.85	90.72
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	81.56	90.52
PGSC0003DMT400031937	Potato	extracellular	90.4	90.4
Solyc03g082920.2.1	Tomato	nucleus, plastid	89.51	89.51
Zm00001d014993_P001	Maize	endoplasmic reticulum	88.76	89.29
TraesCS6A01G042600.1	Wheat	golgi	88.61	88.87
Zm00001d054043_P007	Maize	endoplasmic reticulum	88.31	88.84
TraesCS6D01G049100.1	Wheat	golgi	88.46	88.72
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	88.46	88.72
AT5G28540.1	Thale cress	endoplasmic reticulum	88.91	88.64
Os02t0115900-02	Rice	plasma membrane	88.31	88.57
CDX67525	Canola	endoplasmic reticulum	76.61	88.56
Bra022819.1-P	Field mustard	endoplasmic reticulum	88.76	88.49
CDY23972	Canola	endoplasmic reticulum	85.16	88.47
CDX84809	Canola	endoplasmic reticulum	85.16	88.47
Solyc06g052050.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	82.01	88.37
CDY63497	Canola	endoplasmic reticulum	85.01	88.32
CDY46766	Canola	endoplasmic reticulum	85.01	88.32
CDX79726	Canola	endoplasmic reticulum	85.01	88.32
Bra028521.1-P	Field mustard	endoplasmic reticulum	88.01	88.27
CDX77423	Canola	cytosol, endoplasmic reticulum	84.86	88.16
Bra015047.1-P	Field mustard	endoplasmic reticulum	88.01	88.14
AT5G42020.3	Thale cress	endoplasmic reticulum	88.31	87.52
CDY13371	Canola	cytosol, endoplasmic reticulum	88.16	87.37
Bra023110.1-P	Field mustard	endoplasmic reticulum	83.21	86.45
KRH60091	Soybean	nucleus	90.4	86.02
KRH41372	Soybean	endoplasmic reticulum	89.95	84.75
KXG29291	Sorghum	plasma membrane	84.86	83.48
GSMUA_Achr4P11940_001	Banana	cytosol	89.81	82.96
VIT_14s0060g02340.t01	Wine grape	endoplasmic reticulum	78.71	80.89
VIT_06s0004g04510.t01	Wine grape	cytosol, extracellular	61.17	62.96
VIT_06s0004g04470.t01	Wine grape	cytosol	61.32	62.73
VIT_08s0007g00130.t01	Wine grape	cytosol	61.02	62.71
VIT_13s0019g01430.t01	Wine grape	cytosol	60.87	62.46
GSMUA_Achr5P10770_001	Banana	cytosol	68.37	61.79
VIT_11s0037g00510.t01	Wine grape	cytosol	60.27	61.28
VIT_13s0019g00930.t01	Wine grape	cytosol	57.42	57.68
VIT_03s0097g00530.t01	Wine grape	mitochondrion	49.48	48.6
VIT_00s0415g00030.t01	Wine grape	mitochondrion	48.58	47.51
VIT_18s0041g01230.t01	Wine grape	plastid	45.73	44.2
VIT_17s0000g03310.t01	Wine grape	extracellular, plastid	46.03	43.42

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100253826	wikigene:100253826	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10
MapMan:35.1	ProteinID:CCB48058	ProteinID:CCB48058.1	ncoils:Coil	UniProt:F6H7B3	EMBL:FN595247
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0005788	GO:GO:0008150
GO:GO:0009705	GO:GO:0009987	GO:GO:0016020	GO:GO:0034975	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EntrezGene:LOC100253826	wikigene:LOC100253826
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	TIGR:TC62454
TMHMM:TMhelix	UniParc:UPI000210A397	ArrayExpress:VIT_16s0098g01580	EnsemblPlantsGene:VIT_16s0098g01580	EnsemblPlants:VIT_16s0098g01580.t01	RefSeq:XP_002276268
RefSeq:XP_002276268.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr16:-:21738759..21742840

Molecular Weight (calculated)

73493.3 Da

IEP (calculated)

4.776

GRAVY (calculated)

-0.436

Length

667 amino acids

Sequence
(BLAST)

001: MYGAWGLRAS SVVLGILLVG CLVAISIAKE ESNKLGTVIG IDLGTTYSCV GVYKNGHVEI IANDQGNRIT PSWVAFTDTE RLIGEAAKNQ AAVNAERTVF
101: DVKRLIGRKF DDKEVQKDMK LFPFKIVNKD GKPYIQVKIK DGETKVFSPE EISAMILTKM KETAEAFLGK TIKDAVVTVP AYFNDAQRQA TKDAGIIAGL
201: NVARIINEPT AAAIAYGLDK KGGEKNILVF DLGGGTFDVS ILTIDNGVFE VLATNGDTHL GGEDFDQRIM EYFIKLIKKK HGKDISKDNR AIGKLRRESE
301: RAKRALSSQH QVRVEIESLY DGLDFSEPLT RARFEELNND LFRKTMGPVK KAMEDAGLEK RQIDEIVLVG GSTRIPKVQQ LLKEYFDGKE PNKGVNPDEA
401: VAYGAAVQGS ILSGEGGDET KDILLLDVAP LTLGIETVGG VMTKLIPRNT VIPTKKSQVF TTYQDQQTTV SIQVFEGERS LTKDCRELGK FDLSGIAPAP
501: RGTPQIEVTF EVDANGILNV KAEDKASGKS EKITITNDKG RLSQEEIDRM VREAEEFAEE DKKIKEKIDA RNSLESYVYN MKTQINDKDK LADKLESEEK
601: EKIETAVKEA LEWLDDNQNA ETEDYQEKLK EVEAVCNPII TAVYQRSGGA PGGSSDAGED EDSHDEL

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.