Factsheet for VIT_00s0415g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0097g00530.t01	Wine grape	mitochondrion	89.74	90.13
GSMUA_Achr4P19830_001	Banana	mitochondrion	87.1	87.22
Os02t0774300-01	Rice	mitochondrion	84.9	85.27
Os03t0113700-01	Rice	mitochondrion	84.31	85.06
Zm00001d013842_P003	Maize	mitochondrion	83.87	84.37
EER91365	Sorghum	mitochondrion	83.72	84.22
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	83.58	84.07
TraesCSU01G116400.1	Wheat	mitochondrion	81.67	82.89
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	81.82	82.67
TraesCS4B01G397600.1	Wheat	mitochondrion	81.67	82.27
TraesCS1A01G295600.1	Wheat	mitochondrion	82.26	82.14
TraesCS3D01G296700.1	Wheat	golgi	81.82	81.7
TraesCS3A01G305100.3	Wheat	mitochondrion	81.82	81.58
TraesCS3B01G331400.4	Wheat	mitochondrion	81.52	81.29
HORVU4Hr1G089090.8	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	80.21	80.8
HORVU0Hr1G006930.3	Barley	cytosol	56.6	80.58
HORVU3Hr1G073230.9	Barley	endoplasmic reticulum, golgi	81.67	79.8
VIT_18s0041g01230.t01	Wine grape	plastid	51.17	50.58
VIT_17s0000g03310.t01	Wine grape	extracellular, plastid	51.32	49.51
VIT_08s0007g00130.t01	Wine grape	cytosol	46.63	49.0
VIT_14s0060g02340.t01	Wine grape	endoplasmic reticulum	46.63	49.0
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	47.51	48.58
VIT_06s0004g04470.t01	Wine grape	cytosol	46.33	48.47
VIT_06s0004g04510.t01	Wine grape	cytosol, extracellular	46.04	48.46
VIT_13s0019g01430.t01	Wine grape	cytosol	46.04	48.31
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	47.21	48.28
VIT_11s0037g00510.t01	Wine grape	cytosol	46.04	47.87
VIT_13s0019g00930.t01	Wine grape	cytosol	44.43	45.63

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100248447	wikigene:100248447	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40
Gene3D:3.90.640.10	MapMan:7.11.2.2.5	ProteinID:CCB50032	ProteinID:CCB50032.1	InterPro:Chaperone_DnaK	ncoils:Coil
UniProt:F6HCT7	EMBL:FN595524	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EntrezGene:LOC100248447
wikigene:LOC100248447	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329
ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF333	SUPFAM:SSF100920	SUPFAM:SSF53067	TIGR:TC61859
TIGR:TC67902	TIGRFAMs:TIGR02350	UniParc:UPI0002109890	ArrayExpress:VIT_00s0415g00030	EnsemblPlantsGene:VIT_00s0415g00030	EnsemblPlants:VIT_00s0415g00030.t01
unigene:Vvi.23862	unigene:Vvi.7686	RefSeq:XP_002272173	RefSeq:XP_002272173.2	SEG:seg	:

Description

No Description!

Coordinates

chrUn:+:28290680..28295392

Molecular Weight (calculated)

73275.3 Da

IEP (calculated)

5.600

GRAVY (calculated)

-0.303

Length

682 amino acids

Sequence
(BLAST)

001: MATSVLLRCL KRRDLQSSSL AAYRSLTGNA KTSVSTSPAV QKWASYIRPF SSKPAGNDVI GIDLGTTNSC VSVMEGKNAK VIENSEGART TPSVVAINQK
101: GELIVGTPAK RQAVTNPTNT VFGTKRLIGR RFDDPQTQKE MKMVPFKIVR APNGDAWVEA NGQQYSPSQI GAFVLTKMKE TAEAYLGKTV SKAVITVPAY
201: FNDAQRQATK DAGRIAGLDV QRIINEPTAA ALSYGLNNKE GLIAVFDLGG GTFDVSILEI SNGVFEVKAT NGDTFLGGED FDNALLEFLV SEFKRTEGID
301: LTKDRLALQR LREAAEKAKI ELSSTSQTDI NLPFITADAS GAKHLNITLT RSKFEALVDK LIERTRNPCK SCLKDAGISV KEVDEVLLVG GMTRVPKVQE
401: VVAEIFGKSP SKGVNPDEAV AMGAAIQGGI LRGDVKELLL LDVTPLSLGI ETLGGIFTRL INRNTTIPTK KSQVFSTAAD NQTQVGVKVL QGEREMATDN
501: KLLGEFELVG IPPAPRGMPQ IEVTFDIDAN GIVTVSAKDK STGKEQQITI RSSGGLSDDE IEKMVKEAEL HAQRDQERKA LIDIRNSADT TIYSIEKSLD
601: EYRDKIPAEV AKEIEAAVAD LRDAMQKENI DEIKAKLDAA NKAVSKIGQH MSGGSGGAAS GGSEGSTSSD QTPEAEYEQA KK

Best Arabidopsis Sequence Match ( AT5G09590.1 )
(BLAST)

001: MATAALLRSI RRREVVSSPF SAYRCLSSSG KASLNSSYLG QNFRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNTK
101: GELLVGTPAK RQAVTNPTNT VSGTKRLIGR KFDDPQTQKE MKMVPYKIVR APNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSV TKAVVTVPAY
201: FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV NEFKTTEGID
301: LAKDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSRFETLVNH LIERTRDPCK NCLKDAGISA KEVDEVLLVG GMTRVPKVQS
401: IVAEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL ITRNTTIPTK KSQVFSTAAD NQTQVGIRVL QGEREMATDN
501: KLLGEFDLVG IPPSPRGVPQ IEVTFDIDAN GIVTVSAKDK TTGKVQQITI RSSGGLSEDD IQKMVREAEL HAQKDKERKE LIDTKNTADT TIYSIEKSLG
601: EYREKIPSEI AKEIEDAVAD LRSASSGDDL NEIKAKIEAA NKAVSKIGEH MSGGSGGGSA PGGGSEGGSD QAPEAEYEEV KK

Arabidopsis Description

HSP70-10Heat shock 70 kDa protein 10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.