Factsheet for VIT_02s0025g02140.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
endoplasmic reticulum 9
extracellular 4
vacuole 4
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41370	Soybean	endoplasmic reticulum	94.6	94.6
KRH60086	Soybean	endoplasmic reticulum	94.6	94.46
Solyc08g082820.2.1	Tomato	extracellular	93.55	93.69
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	93.25	93.25
PGSC0003DMT400031937	Potato	extracellular	92.95	92.95
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	83.36	92.51
PGSC0003DMT400047710	Potato	endoplasmic reticulum	92.35	92.22
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	84.26	92.13
Solyc03g082920.2.1	Tomato	nucleus, plastid	91.15	91.15
Zm00001d014993_P001	Maize	endoplasmic reticulum	90.55	91.1
Zm00001d054043_P007	Maize	endoplasmic reticulum	90.4	90.95
CDX67525	Canola	endoplasmic reticulum	78.56	90.81
Bra028521.1-P	Field mustard	endoplasmic reticulum	90.4	90.68
AT5G28540.1	Thale cress	endoplasmic reticulum	90.7	90.43
TraesCS6A01G042600.1	Wheat	golgi	90.1	90.38
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	90.1	90.38
TraesCS6D01G049100.1	Wheat	golgi	90.1	90.38
Os02t0115900-02	Rice	plasma membrane	90.1	90.38
CDY63497	Canola	endoplasmic reticulum	86.96	90.34
CDY23972	Canola	endoplasmic reticulum	86.66	90.03
CDX84809	Canola	endoplasmic reticulum	86.66	90.03
CDX77423	Canola	cytosol, endoplasmic reticulum	86.66	90.03
Bra022819.1-P	Field mustard	endoplasmic reticulum	90.25	89.99
Bra015047.1-P	Field mustard	endoplasmic reticulum	89.81	89.94
CDY46766	Canola	endoplasmic reticulum	86.51	89.88
CDX79726	Canola	endoplasmic reticulum	86.51	89.88
Solyc06g052050.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	82.91	89.34
KRH60091	Soybean	nucleus	93.85	89.3
CDY13371	Canola	cytosol, endoplasmic reticulum	89.95	89.15
AT5G42020.3	Thale cress	endoplasmic reticulum	89.66	88.86
Bra023110.1-P	Field mustard	endoplasmic reticulum	84.71	88.01
KRH41372	Soybean	endoplasmic reticulum	93.1	87.71
KXG29291	Sorghum	plasma membrane	86.96	85.55
GSMUA_Achr4P11940_001	Banana	cytosol	92.35	85.32
VIT_14s0060g02340.t01	Wine grape	endoplasmic reticulum	78.11	80.28
VIT_06s0004g04510.t01	Wine grape	cytosol, extracellular	61.32	63.12
VIT_08s0007g00130.t01	Wine grape	cytosol	61.32	63.02
GSMUA_Achr5P10770_001	Banana	cytosol	69.72	63.01
VIT_06s0004g04470.t01	Wine grape	cytosol	61.47	62.88
VIT_13s0019g01430.t01	Wine grape	cytosol	61.02	62.62
VIT_11s0037g00510.t01	Wine grape	cytosol	60.42	61.43
VIT_13s0019g00930.t01	Wine grape	cytosol	56.82	57.08
VIT_03s0097g00530.t01	Wine grape	mitochondrion	49.48	48.6
VIT_00s0415g00030.t01	Wine grape	mitochondrion	48.28	47.21
VIT_18s0041g01230.t01	Wine grape	plastid	46.63	45.07
VIT_17s0000g03310.t01	Wine grape	extracellular, plastid	47.08	44.41

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100251379	wikigene:100251379	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10
MapMan:35.1	ProteinID:CCB58278	ProteinID:CCB58278.1	ncoils:Coil	UniProt:F6HU55	EMBL:FN596251
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EntrezGene:LOC100251379	wikigene:LOC100251379
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	TIGR:TC53058	TMHMM:TMhelix
UniParc:UPI00015CD1B8	ArrayExpress:VIT_02s0025g02140	EnsemblPlantsGene:VIT_02s0025g02140	EnsemblPlants:VIT_02s0025g02140.t01	unigene:Vvi.4801	RefSeq:XP_002263323
RefSeq:XP_002263323.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:1900784..1904806

Molecular Weight (calculated)

73585.4 Da

IEP (calculated)

4.838

GRAVY (calculated)

-0.472

Length

667 amino acids

Sequence
(BLAST)

001: MESSWRRRGS LIVAAIVCFG FLAAISIAKE EATKLGTVIG IDLGTTYSCV GVYKNGHVEI IANDQGNRIT PSWVAFTDSE RLIGEAAKNQ AAVNAERTIF
101: DVKRLIGRKF EDKEVQKDMK LVPYNIVNKD GKPYIQVKIK DGETKVFSPE EISAMILTKM KETAEAFLGK KIKDAVVTVP AYFNDAQRQA TKDAGVIAGL
201: NVARIINEPT AAAIAYGLDK KGGEKNILVF DLGGGTFDVS ILTIDNGVFE VLATNGDTHL GGEDFDQRIM EYFIKLIKKK HGKDISKDNR ALGKLRREAE
301: RAKRALSSQH QVRVEIESLY DGLDFSEPLT RARFEELNND LFRKTMGPVK KAMEDAGLEK RQIDEIVLVG GSTRIPKVQQ LLKDYFDGKE PNKGVNPDEA
401: VAFGAAVQGS ILSGEGGDET KDILLLDVAP LTLGIETVGG VMTKLIPRNT VIPTKKSQVF TTYQDQQTTV SIQVFEGERS LTKDCRQLGK FDLNGIPPAP
501: RGTPQIEVTF EVDANGILNV KAEDKGTGKS EKITITNDKG RLSQEEIDRM VREAEEFAEE DKKVKEKIDA RNSLETYVYN MKNQINDKDK LADKLESDEK
601: EKIETAVKEA LEWLDDNQSA EKEDYDEKLK EVEAVCNPII TAVYQRSGGA PGAGSDGGED DDSHDEL

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.