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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 3
  • mitochondrion 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:endoplasmic reticulum, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:endoplasmic reticulum
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum, nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 plasma membrane: 19658398
nucleus: 24385303
extracellular: 25724908
endoplasmic reticulum: 27224218
nucleus: 27291164
msms PMID: 24385303 doi
S Komatsu, S Hiraga, MZ Nouri
National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba, 305-8518, Japan, skomatsu@affrc.go.jp.
msms PMID: 19658398 doi
S Komatsu, T Wada, Y Abaléa, MZ Nouri, Y Nanjo, N Nakayama, S Shimamura, R Yamamoto, T Nakamura, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 25724908 doi
VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH60086 Soybean endoplasmic reticulum 92.58 97.16
KRH41370 Soybean endoplasmic reticulum 91.58 96.25
VIT_02s0025g02140.t01 Wine grape endoplasmic reticulum 89.3 93.85
KRH41372 Soybean endoplasmic reticulum 94.72 93.79
Solyc08g082820.2.1 Tomato extracellular 89.02 93.69
PGSC0003DMT400031937 Potato extracellular 88.45 92.95
GSMUA_Achr3P27250_001 Banana endoplasmic reticulum 79.03 92.18
GSMUA_Achr9P23710_001 Banana endoplasmic reticulum 80.17 92.13
Os02t0115900-02 Rice plasma membrane 87.02 91.73
PGSC0003DMT400047710 Potato endoplasmic reticulum 87.3 91.62
Zm00001d014993_P001 Maize endoplasmic reticulum 86.59 91.55
Zm00001d054043_P007 Maize endoplasmic reticulum 86.45 91.4
Solyc03g082920.2.1 Tomato nucleus, plastid 86.88 91.3
TraesCS6A01G042600.1 Wheat golgi 86.45 91.13
TraesCS6B01G058300.1 Wheat endoplasmic reticulum 86.45 91.13
TraesCS6D01G049100.1 Wheat golgi 86.45 91.13
CDX67525 Canola endoplasmic reticulum 74.89 90.99
AT5G28540.1 Thale cress endoplasmic reticulum 86.45 90.58
Bra028521.1-P Field mustard endoplasmic reticulum 85.88 90.53
CDX77423 Canola cytosol, endoplasmic reticulum 82.88 90.5
CDY63497 Canola endoplasmic reticulum 82.88 90.5
VIT_16s0098g01580.t01 Wine grape endoplasmic reticulum 86.02 90.4
CDX84809 Canola endoplasmic reticulum 82.74 90.34
CDY23972 Canola endoplasmic reticulum 82.74 90.34
Bra022819.1-P Field mustard endoplasmic reticulum 86.16 90.28
Bra015047.1-P Field mustard endoplasmic reticulum 85.73 90.24
CDX79726 Canola endoplasmic reticulum 82.31 89.88
CDY46766 Canola endoplasmic reticulum 82.31 89.88
CDY13371 Canola cytosol, endoplasmic reticulum 85.73 89.3
AT5G42020.3 Thale cress endoplasmic reticulum 85.31 88.86
Bra023110.1-P Field mustard endoplasmic reticulum 80.88 88.32
KXG29291 Sorghum plasma membrane 83.74 86.58
GSMUA_Achr4P11940_001 Banana cytosol 88.45 85.87
KRH29811 Soybean nucleus 59.77 64.56
KRH03029 Soybean nucleus 59.34 64.5
KRH24810 Soybean nucleus 59.63 64.41
KRH01631 Soybean endoplasmic reticulum 59.63 64.41
KRH19702 Soybean endoplasmic reticulum 57.35 63.61
KRH70484 Soybean cytosol 50.64 63.39
KRH72327 Soybean endoplasmic reticulum 58.77 63.19
KRG95806 Soybean nucleus 58.92 63.15
KRH67530 Soybean endoplasmic reticulum, nucleus 58.77 63.09
GSMUA_Achr5P10770_001 Banana cytosol 66.05 62.74
KRH11084 Soybean endoplasmic reticulum 49.79 54.45
KRH11083 Soybean cytosol, endoplasmic reticulum 44.51 53.06
KRH49659 Soybean endoplasmic reticulum 47.08 52.13
KRH01651 Soybean cytosol 44.37 51.66
KRH01609 Soybean cytosol 47.65 49.63
KRH01610 Soybean cytosol, endoplasmic reticulum 47.08 49.03
KRH10640 Soybean nucleus 46.22 48.07
KRH49859 Soybean endoplasmic reticulum, nucleus 46.36 48.01
KRH21710 Soybean endoplasmic reticulum 46.08 47.92
KRH42039 Soybean mitochondrion 46.22 47.86
KRH26302 Soybean plastid 18.83 47.83
KRH06058 Soybean mitochondrion 44.65 45.43
KRH26303 Soybean cytosol, endoplasmic reticulum 16.41 43.07
KRH21163 Soybean endoplasmic reticulum 29.67 42.54
KRH70355 Soybean cytosol 48.07 37.78
Protein Annotations
Gene3D:1.20.1270.10Gene3D:2.60.34.10Gene3D:3.30.420.40Gene3D:3.90.640.10MapMan:35.1EMBL:ACUP02003347
ncoils:CoilEnsemblPlantsGene:GLYMA_05G219600GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524
InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sfInterPro:Heat_shock_70_CSInterPro:Hsp_70_famUniProt:I1K668InterPro:IPR029047
InterPro:IPR029048EnsemblPlants:KRH60091ProteinID:KRH60091ProteinID:KRH60091.1PFAM:PF00012PRINTS:PR00301
ScanProsite:PS00297ScanProsite:PS00329ScanProsite:PS01036PANTHER:PTHR19375PANTHER:PTHR19375:SF317SUPFAM:SSF100920
SUPFAM:SSF100934SUPFAM:SSF53067TMHMM:TMhelixUniParc:UPI0002956F49SEG:seg:
Description
hypothetical protein
Coordinates
chr5:+:39907980..39911966
Molecular Weight (calculated)
77644.8 Da
IEP (calculated)
5.268
GRAVY (calculated)
-0.455
Length
701 amino acids
Sequence
(BLAST)
001: MLVLSSEHYK WRSPRRKLNK TAIRPSRKER KGDMIMARSF SRGSLLPLAI VSLVCLFVIS IAKEEATKLG TVIGIDLGTT YSCVGVYKNG HVEIIANDQG
101: NRITPSWVAF TDSERLIGEA AKNLAAVNPE RTIFDVKRLI GRKFEDKEVQ RDMKLVPYKI VNKDGKPYIQ VKIKDGETKV FSPEEISAMI LTKMKETAEA
201: FLGKKINDAV VTVPAYFNDA QRQATKDAGV IAGLNVARII NEPTAAAIAY GLDKKGGEKN ILVFDLGGGT FDVSILTIDN GVFEVLATNG DTHLGGEDFD
301: QRIMEYFIKL IKKKHGKDIS KDSRALGKLR REAERAKRAL SSQHQVRVEI ESLFDGVDFS EPLTRARFEE LNNDLFRKTM GPVKKAMEDA GLQKSQIDEI
401: VLVGGSTRIP KVQQLLKDYF DGKEPNKGVN PDEAVAYGAA VQGSILSGEG GEETKDILLL DVAPLTLGIE TVGGVMTKLI PRNTVIPTKK SQVFTTYQDQ
501: QTTVSIQVFE GERSLTKDCR LLGKFELSGI PPAPRGTPQI EVTFEVDANG ILNVKAEDKG TGKSEKITIT NEKGRLSQEE IERMVREAEE FAEEDKKVKE
601: RIDARNSLET YVYNMKNQIG DKDKLADKLE SDEKEKIETA VKEALEWLDD NQSVEKEEYE EKLKEVEAVC NPIISAVYQR SGGAPGGGAS GEEDDDSHDE
701: L
Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)
001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL
Arabidopsis Description
BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.