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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 7
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79726 Canola endoplasmic reticulum 99.38 99.38
CDY23972 Canola endoplasmic reticulum 98.91 98.91
CDX84809 Canola endoplasmic reticulum 98.91 98.91
CDY63497 Canola endoplasmic reticulum 97.98 97.98
CDX77423 Canola cytosol, endoplasmic reticulum 97.66 97.66
Bra023110.1-P Field mustard endoplasmic reticulum 97.51 97.51
CDX67525 Canola endoplasmic reticulum 86.45 96.19
AT5G28540.1 Thale cress endoplasmic reticulum 96.57 92.68
CDY13371 Canola cytosol, endoplasmic reticulum 95.02 90.64
AT5G42020.3 Thale cress endoplasmic reticulum 94.86 90.49
KRH41370 Soybean endoplasmic reticulum 90.81 87.41
KRH60086 Soybean endoplasmic reticulum 90.65 87.13
PGSC0003DMT400047710 Potato endoplasmic reticulum 90.19 86.68
VIT_02s0025g02140.t01 Wine grape endoplasmic reticulum 89.88 86.51
PGSC0003DMT400031937 Potato extracellular 89.72 86.36
TraesCS6D01G049100.1 Wheat golgi 88.16 85.11
TraesCS6B01G058300.1 Wheat endoplasmic reticulum 88.16 85.11
TraesCS6A01G042600.1 Wheat golgi 88.16 85.11
Os02t0115900-02 Rice plasma membrane 88.16 85.11
VIT_16s0098g01580.t01 Wine grape endoplasmic reticulum 88.32 85.01
GSMUA_Achr9P23710_001 Banana endoplasmic reticulum 80.53 84.75
Zm00001d014993_P001 Maize endoplasmic reticulum 87.38 84.62
Zm00001d054043_P007 Maize endoplasmic reticulum 87.07 84.31
GSMUA_Achr3P27250_001 Banana endoplasmic reticulum 78.5 83.86
Solyc06g052050.2.1 Tomato endoplasmic reticulum, nucleus, unclear 80.06 83.04
KRH60091 Soybean nucleus 89.88 82.31
KRH41372 Soybean endoplasmic reticulum 89.1 80.79
KXG29291 Sorghum plasma membrane 84.58 80.09
GSMUA_Achr4P11940_001 Banana cytosol 87.85 78.12
CDY22648 Canola cytosol 72.74 77.19
CDY06347 Canola endoplasmic reticulum 72.43 72.43
CDY00784 Canola cytosol 61.06 60.31
CDX73815 Canola cytosol 61.22 60.28
CDY50531 Canola cytosol 60.59 59.85
CDY52661 Canola cytosol 60.28 59.81
CDY33359 Canola cytosol 48.13 59.65
CDY35063 Canola cytosol 47.82 59.27
CDX96825 Canola cytosol 59.03 58.31
CDX83960 Canola cytosol 59.03 58.31
GSMUA_Achr5P10770_001 Banana cytosol 66.04 57.45
CDY49668 Canola cytosol 40.81 52.61
CDY40362 Canola cytosol, mitochondrion 36.14 51.1
CDY11007 Canola cytosol 43.93 45.34
CDX85810 Canola mitochondrion 47.98 45.29
CDY56552 Canola mitochondrion 47.98 45.23
CDX81132 Canola mitochondrion 47.98 45.23
CDY34275 Canola cytosol 43.93 45.12
CDY24832 Canola cytosol 43.93 45.12
CDY08914 Canola cytosol 43.61 45.09
CDX90397 Canola mitochondrion 47.04 44.54
CDX75683 Canola mitochondrion 47.2 44.43
CDX69342 Canola mitochondrion 47.04 44.41
CDY49682 Canola mitochondrion 47.04 44.35
CDX92631 Canola plastid 45.95 41.67
CDY03462 Canola plastid 45.79 41.29
CDY03461 Canola plastid 43.61 39.38
CDY44807 Canola mitochondrion 46.88 38.1
CDY03459 Canola cytosol 39.1 37.92
CDY49667 Canola nucleus 2.34 20.0
Protein Annotations
Gene3D:1.20.1270.10Gene3D:2.60.34.10Gene3D:3.30.420.40Gene3D:3.90.640.10MapMan:35.1GO:A0A078IA62
UniProt:A0A078IA62EnsemblPlants:CDY46766ProteinID:CDY46766ProteinID:CDY46766.1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00086093001InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CSInterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048PFAM:PF00012PRINTS:PR00301
ScanProsite:PS00297ScanProsite:PS00329ScanProsite:PS01036PFscan:PS51257PANTHER:PTHR19375PANTHER:PTHR19375:SF317
SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF3726
SEG:seg:::::
Description
BnaA03g17100DBnaA03g17100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IA62]
Coordinates
chrLK032684:+:143882..146784
Molecular Weight (calculated)
70510.7 Da
IEP (calculated)
4.777
GRAVY (calculated)
-0.432
Length
642 amino acids
Sequence
(BLAST)
001: MARSLGANGT IVLAIIFVGC VFAFSTAKEE ATKLGTVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDNER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFA DKEVQKDRKL VPYQIVDKDG KPYIQVKIKD GETKVFSPEE VSAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIMD YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GLDFSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGNF DLTGIPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASEEFA EEDKKVKERI DARNSLETYV YNMKNQVNDK DKLADKLEAD EKEKIEAATK EALEWLDENQ NSEKEEYDEK
601: LKEVEAVCNP IITAVYQRSG GAPGGAGGES ATEEEDESHD EL
Best Arabidopsis Sequence Match ( AT5G42020.3 )
(BLAST)
001: MCSLFLDLNV FVYNVVLQFH DLKGCLFAFS TAKEEATKLG SVIGIDLGTT YSCVGVYKNG HVEIIANDQG NRITPSWVGF TDSERLIGEA AKNQAAVNPE
101: RTVFDVKRLI GRKFEDKEVQ KDRKLVPYQI VNKDGKPYIQ VKIKDGETKV FSPEEISAMI LTKMKETAEA YLGKKIKDAV VTVPAYFNDA QRQATKDAGV
201: IAGLNVARII NEPTAAAIAY GLDKKGGEKN ILVFDLGGGT FDVSVLTIDN GVFEVLSTNG DTHLGGEDFD HRIMEYFIKL IKKKHQKDIS KDNKALGKLR
301: RECERAKRAL SSQHQVRVEI ESLFDGVDLS EPLTRARFEE LNNDLFRKTM GPVKKAMDDA GLQKSQIDEI VLVGGSTRIP KVQQLLKDFF EGKEPNKGVN
401: PDEAVAYGAA VQGGILSGEG GDETKDILLL DVAPLTLGIE TVGGVMTKLI PRNTVIPTKK SQVFTTYQDQ QTTVSIQVFE GERSLTKDCR LLGKFDLTGV
501: PPAPRGTPQI EVTFEVDANG ILNVKAEDKA SGKSEKITIT NEKGRLSQEE IDRMVKEAEE FAEEDKKVKE KIDARNALET YVYNMKNQVS DKDKLADKLE
601: GDEKEKIEAA TKEALEWLDE NQNSEKEEYD EKLKEVEAVC NPIITAVYQR SGGAPGAGGE SSTEEEDESH DEL
Arabidopsis Description
BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.