CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34275	Canola	cytosol	86.24	98.24
CDY08914	Canola	cytosol	83.85	96.14
CDY11007	Canola	cytosol	83.57	95.66
CDY24832	Canola	cytosol	83.57	95.2
CDX92631	Canola	plastid	92.7	93.22
AT4G24280.1	Thale cress	plastid	93.82	93.04
KRH26302	Soybean	plastid	33.29	85.87
VIT_17s0000g03310.t01	Wine grape	extracellular, plastid	85.11	85.71
Os05t0303000-01	Rice	plastid	55.06	85.4
KRH06058	Soybean	mitochondrion	82.44	85.2
KXG37805	Sorghum	plastid	81.18	84.75
Zm00001d013507_P001	Maize	plastid	81.04	84.48
GSMUA_Achr6P28370_001	Banana	plastid	76.12	84.42
PGSC0003DMT400064031	Potato	cytosol, plastid	83.71	84.42
Zm00001d033591_P001	Maize	plastid	80.9	84.33
CDY03461	Canola	plastid	84.13	84.25
GSMUA_Achr9P07750_001	Banana	plastid	75.98	84.14
VIT_18s0041g01230.t01	Wine grape	plastid	81.32	83.91
KRH26303	Soybean	cytosol, endoplasmic reticulum	31.32	83.52
TraesCS1D01G131800.1	Wheat	plastid	79.78	83.28
TraesCS1A01G133100.2	Wheat	golgi	79.63	82.89
TraesCS1B01G151300.1	Wheat	plastid	79.63	82.65
Solyc11g020040.1.1	Tomato	plastid	79.35	81.65
EES15917	Sorghum	plastid	80.34	81.48
Zm00001d023802_P001	Maize	plastid	79.78	80.8
TraesCS5D01G117600.1	Wheat	plastid	77.81	80.29
Zm00001d041119_P001	Maize	plastid	79.21	80.23
TraesCS5B01G111200.1	Wheat	golgi, plastid	77.67	80.14
TraesCS5A01G106200.2	Wheat	plastid	77.53	80.0
Os12t0244100-01	Rice	plastid	77.95	79.51
HORVU5Hr1G032650.1	Barley	plastid	77.25	79.48
CDY03459	Canola	cytosol	70.65	75.98
HORVU1Hr1G030790.1	Barley	plastid	79.92	72.95
CDX85810	Canola	mitochondrion	50.56	52.94
CDX81132	Canola	mitochondrion	50.42	52.72
CDY56552	Canola	mitochondrion	50.42	52.72
CDX90397	Canola	mitochondrion	50.0	52.51
CDY49682	Canola	mitochondrion	50.14	52.42
CDX75683	Canola	mitochondrion	49.02	51.17
CDX69342	Canola	mitochondrion	48.74	51.03
CDY35063	Canola	cytosol	34.55	47.49
CDY33359	Canola	cytosol	34.55	47.49
CDY22648	Canola	cytosol	40.17	47.27
CDX67525	Canola	endoplasmic reticulum	38.06	46.97
CDY52661	Canola	cytosol	42.42	46.68
CDY50531	Canola	cytosol	42.42	46.46
CDY00784	Canola	cytosol	42.13	46.15
CDX73815	Canola	cytosol	42.13	46.01
CDY23972	Canola	endoplasmic reticulum	41.43	45.95
CDX77423	Canola	cytosol, endoplasmic reticulum	41.43	45.95
CDX79726	Canola	endoplasmic reticulum	41.43	45.95
CDX84809	Canola	endoplasmic reticulum	41.43	45.95
CDY63497	Canola	endoplasmic reticulum	41.43	45.95
CDY46766	Canola	endoplasmic reticulum	41.29	45.79
CDY13371	Canola	cytosol, endoplasmic reticulum	43.12	45.62
CDX83960	Canola	cytosol	41.57	45.54
CDX96825	Canola	cytosol	41.43	45.38
CDY44807	Canola	mitochondrion	50.14	45.19
CDY06347	Canola	endoplasmic reticulum	40.31	44.7
CDY40362	Canola	cytosol, mitochondrion	27.67	43.39
GSMUA_Achr6P12370_001	Banana	plastid	76.4	41.62
CDY49668	Canola	cytosol	28.23	40.36
CDY49667	Canola	nucleus	1.97	18.67

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:A0A078EQX3
EnsemblPlants:CDY03462	ProteinID:CDY03462	ProteinID:CDY03462.1	InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00116116001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS
InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012	PRINTS:PR00301
ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI0004EAF4D9	SEG:seg	:

Description

BnaC01g16200D

Coordinates

chrLK031943:-:586869..590062

Molecular Weight (calculated)

76040.9 Da

IEP (calculated)

4.955

GRAVY (calculated)

-0.310

Length

712 amino acids

Sequence
(BLAST)

001: MASSAAQIHV LGGIGITTSS SSKRNLNGKS SFMPRSAFFG ARNGPFTTPT SAFLRMRSRN GGSSRYAVGP VRVVNEKVVG IDLGTTNSAV AAMEGGKPTI
101: VTNAEGQRTT PSVVAYTKSG DRLVGQIAKR QAVVNPENTF FSVKRFIGRR MSEVAEESKQ VSYRVVKDEN GNVKLECPAI GKQFAAEEIS AQVLRKLVDD
201: ASRFLNDKVT KAVITVPAYF NDSQRTATKD AGRIAGLDVL RIINEPTAAS LAYGFERKSN ETILVFDLGG GTFDVSVLEV GDGVFEVLST SGDTHLGGDD
301: FDKRVVDWLA SNFKKDEGID LLKDKQALQR LTEAAEKAKI ELSSLTQTNM SLPFITATAD GPKHIETTLT RAKFEELCSD LLDRCKTPVE NSLRDAKLSF
401: SDIDEVILVG GSTRIPAVQE VVRKLTGKEP NVTVNPDEVV ALGAAVQAGV LAGDVSDIVL LDVTPLSIGL ETLGGVMTKI IPRNTTLPTS KSEVFSTAAD
501: GQTSVEINVL QGEREFVKDN KSLGSFRLDG IPPAPRGVPQ IEVKFDIDAN GILSVSASDK GTGKKQDITI TGASTLPKDE VDQMVQEAER FAKDDKEKRD
601: AIDTKNQADS IVYQTEKQLK ELGEKIPGEV KGKVEAKLQE LKDKIASGTT QEIKDTMAAL NQEVMQIGQS MYNQPGAGAG ASPSPGGEAA SSADSSSKDG
701: DDVIDADFTD SK

Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Arabidopsis Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.