Factsheet for GSMUA_Achr6P12370_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P07750_001	Banana	plastid	43.08	87.56
GSMUA_Achr6P28370_001	Banana	plastid	42.16	85.83
Os05t0303000-01	Rice	plastid	29.61	84.31
KRH06058	Soybean	mitochondrion	43.31	82.15
Bra002461.1-P	Field mustard	cytosol	33.36	82.11
CDY08914	Canola	cytosol	38.79	81.64
CDY24832	Canola	cytosol	38.87	81.28
CDY34275	Canola	cytosol	38.87	81.28
Zm00001d013507_P001	Maize	plastid	42.46	81.26
CDY11007	Canola	cytosol	38.64	81.19
KXG37805	Sorghum	plastid	42.31	81.08
TraesCS1D01G131800.1	Wheat	plastid	42.31	81.08
TraesCS1B01G151300.1	Wheat	plastid	42.31	80.61
TraesCS1A01G133100.2	Wheat	golgi	42.16	80.56
Zm00001d033591_P001	Maize	plastid	41.93	80.23
VIT_18s0041g01230.t01	Wine grape	plastid	42.08	79.71
Solyc01g103450.2.1	Tomato	plastid	42.69	79.37
PGSC0003DMT400064031	Potato	cytosol, plastid	42.69	79.04
AT4G24280.1	Thale cress	plastid	42.39	77.16
Bra013786.1-P	Field mustard	plastid	41.78	76.79
CDY03462	Canola	plastid	41.62	76.4
CDX92631	Canola	plastid	41.32	76.27
Bra019231.1-P	Field mustard	plastid	41.24	75.92
Bra010498.1-P	Field mustard	plastid	41.62	75.87
AT5G49910.1	Thale cress	plastid	41.55	75.63
CDY03461	Canola	plastid	39.02	71.73
HORVU1Hr1G030790.1	Barley	plastid	42.31	70.9
CDY03459	Canola	cytosol	32.13	63.44
GSMUA_Achr3P12480_001	Banana	mitochondrion	23.8	50.9
GSMUA_Achr6P36350_001	Banana	mitochondrion	20.28	50.09
GSMUA_Achr4P19830_001	Banana	mitochondrion	26.01	49.93
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	21.04	45.76
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	21.12	45.25
GSMUA_Achr8P20830_001	Banana	cytosol, plasma membrane	22.04	44.44
GSMUA_Achr10P...	Banana	cytosol	16.07	43.57
GSMUA_Achr6P15270_001	Banana	cytosol	15.15	43.33
GSMUA_Achr7P15160_001	Banana	cytosol	13.93	42.13
GSMUA_Achr4P11940_001	Banana	cytosol	22.57	40.86
GSMUA_Achr9P03960_001	Banana	cytosol	15.84	40.51
GSMUA_Achr5P04580_001	Banana	endoplasmic reticulum	16.14	39.0
GSMUA_Achr5P10770_001	Banana	cytosol	17.9	31.71

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	MapMan:20.1.2.2.6	Gene3D:3.30.420.40	Gene3D:3.90.640.10
InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr6G12370_001
EnsemblPlants:GSMUA_Achr6P12370_001	EnsemblPlants:GSMUA_Achr6T12370_001	InterPro:HAUS_6_N	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS
InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	UniProt:M0T6D5	HAMAP:MF_00332	PFAM:PF00012
PFAM:PF14661	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF332	SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI000294D717	SEG:seg

Description

Stromal 70 kDa heat shock-related protein, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G12370_001]

Coordinates

chr6:-:8257579..8274329

Molecular Weight (calculated)

143151.0 Da

IEP (calculated)

5.080

GRAVY (calculated)

-0.398

Length

1307 amino acids

Sequence
(BLAST)

0001: MAFSAQIHAL GSPTAAATFP STKKPFSSSA FLFFGPNDIK EARLSMRRSS RRGGSHAPLR VVCEKVVGID LGTTNSAVAA MEGGKPTIVT NAEGQRTMPS
0101: VVAYTKNGDR LVGQIAKRQA VDEESKQVSY RVVRDENGNV KLDCPAIGKQ FAAEEISAQV LRKLVDDASK FLNDKVTKAV ITVPAYFNDS QRTATKDAGR
0201: IAGLDVLRII NEPTAASLAY GFEKKNNETI LVFDLGGGTF DVSVLEVGDG VFEVLSTSGD THLGGDDFDK RIVDWLAANF KRDEGIDLLK DKQALQRLTE
0301: TAEKAKMELS TLTQTNISLP FITATADGPK HIEGTLSRAK FEELCSDLLD RLRTPVDNAL KDAKLSFKDL DEVILVGGST RMPAVQELVR KMTGKEPNVT
0401: VNPDEVVALG AAVQVWVLAG DVSDIVLLDV TPLSLGLETL GGVMTKIIPR NTTLPTAKSE VFSTAADGQT SVEINVLQGE REFVRDNKSL GSFRLDGIPP
0501: APRGVPQIEV KFDIDANGIL SVTAVDKGTG KKQDITITGA STLPSDEVER MVKEAEKYAK EDKEKREAID TKNQSESVIY QTEKQLKELG DKVPASVKEK
0601: VEAKLKELKD AILERGDLQE AMATEREKER EAELESAMYT NCLLLGLDPA IIGGGGSPRV GNQIALSLDF DKVWPIFDSA QSREFRKIVQ GIISELESQG
0701: ALPRSNSRVS SLATCCGPRF VELLWQLSVH ALREVHKRTF AADVASNPLP ASLTDVSYLH AAALLPVTKA RIALERRRFL KNANIAVHRQ AAWSNLAHEM
0801: TAEFRGLCAE EAYLQQELEK LQDMKNKAKL EGDLWDDRIS SSSNQNSHLV SKATRLWESL LARQSQHEVL ASGPIEDLIA HREHRYRISG SSLLAAMDLN
0901: SHTSSPGLDT REKRDSSQFQ EQSDDLSRMD DQGGGVYPTV DVAEILRRWT HALQRIHKQS LNLVKANEGE GPELLRSASD SSSSGHAESL AATLAEHRQH
1001: LVSIQGLVDQ LKEVIPAMQM SISDLTEEVN NISSTMVDGF SVQSSTTVQY QSAGRQLERL TDEVAEMTSK FSSAQIEKVS GSPTLKLPHL FNLTPNSLGK
1101: GNQAPKQHPV GSQTNQETLP APKTVSPPVT IDEDGEAQET DDYYAHNIRR SVREAALSSS SSNSELLQER SSDDGSEHFF IPLSTTDAAS QKEIDYVPNW
1201: RNQQLVFSSP REVQAPMNMT DLSCNANSQQ SFIPDMLNKL NGLKENKNLA RLFQPSTEKI QRTHPEVNDT LDQVFSPPLL LESSFFQDAY EDLLAPLSET
1301: DAALMEH

Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Arabidopsis Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.