Factsheet for GSMUA_Achr9P03960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P15160_001	Banana	cytosol	65.36	77.31
GSMUA_Achr10P...	Banana	cytosol	68.3	72.41
GSMUA_Achr6P15270_001	Banana	cytosol	62.04	69.37
KRH24810	Soybean	nucleus	85.52	67.33
GSMUA_Achr8P20830_001	Banana	cytosol, plasma membrane	85.32	67.28
VIT_08s0007g00130.t01	Wine grape	cytosol	85.32	67.18
KRH29811	Soybean	nucleus	85.13	67.03
VIT_06s0004g04470.t01	Wine grape	cytosol	84.93	66.56
Zm00001d047799_P002	Maize	cytosol, extracellular, plasma membrane, plastid	81.02	63.5
EER92466	Sorghum	cytosol	81.02	63.5
Os03t0277300-01	Rice	plastid	81.02	63.4
HORVU4Hr1G059260.1	Barley	cytosol	81.21	63.17
TraesCS4B01G205700.1	Wheat	cytosol, golgi	80.82	62.86
TraesCS4D01G206600.1	Wheat	cytosol	80.82	62.86
TraesCS4A01G098600.1	Wheat	cytosol	80.82	61.73
PGSC0003DMT400022442	Potato	cytosol	57.34	60.29
GSMUA_Achr5P04580_001	Banana	endoplasmic reticulum	63.8	60.26
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	57.73	48.36
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	56.16	47.75
GSMUA_Achr4P11940_001	Banana	cytosol	57.73	40.86
GSMUA_Achr3P12480_001	Banana	mitochondrion	43.05	36.01
GSMUA_Achr4P19830_001	Banana	mitochondrion	44.62	33.48
GSMUA_Achr6P36350_001	Banana	mitochondrion	34.25	33.08
GSMUA_Achr5P10770_001	Banana	cytosol	47.36	32.79
GSMUA_Achr6P28370_001	Banana	plastid	39.73	31.62
GSMUA_Achr9P07750_001	Banana	plastid	39.14	31.1
GSMUA_Achr6P12370_001	Banana	plastid	40.51	15.84

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSMUA_Achr9G03960_001
EnsemblPlants:GSMUA_Achr9P03960_001	EnsemblPlants:GSMUA_Achr9T03960_001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	UniProt:M0TXA5	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297
ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF308	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067
UniParc:UPI0002964963	SEG:seg	:	:	:	:

Description

Heat shock cognate 70 kDa protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G03960_001]

Coordinates

chr9:-:2680800..2683833

Molecular Weight (calculated)

56199.7 Da

IEP (calculated)

5.040

GRAVY (calculated)

-0.382

Length

511 amino acids

Sequence
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVGFTDT ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR FSDASVQSDI KLWPFGVIAG
101: PGDKPMIMKE IAEAYLGSTV KNAVVTVPAY FNDSQRQATK DAGVIAGLNV MRIINEPTAA AIAYGLDKKA TAGDTHLGGE DFDNRMVNHF VQEFKRKHKK
201: DIIDFYTTIT RARFEELNMD LVHDVVLVGG STRIPKVQQL LQDFFNGKEL CKSINPDEAV AYGAAVQAAI LSGEGNEKVF STYSDNQPGV LIQVYEGERT
301: RTRDNNNLLG KFELSGIPPA PRGVPQITVS FDIDANGILN VSAEDKTTGQ KNKITITNDK GRLSKEEIEN MVQEAEKYKA EDEEHKKKKI EDAIEQAIQW
401: LNGNQLAEAD EFEDKMKELE SICNPIIAKM YQGAGADMAG RMDDDVPSAG GSGTGPKIED QLVAVVLGRR LRRLIKCDHS VLSAGCFDSR GVVLVWYQRY
501: VVLDFWPHEM G

Best Arabidopsis Sequence Match ( AT3G12580.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR YSDPSVQADK SHWPFKVVSG
101: PGEKPMIVVN HKGEEKQFSA EEISSMVLIK MREIAEAFLG SPVKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIT GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSSVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVDAKNALEN YAYNMRNTIK DEKIASKLDA ADKKKIEDAI DQAIEWLDGN QLAEADEFED
601: KMKELESLCN PIIARMYQGA GPDMGGAGGM DDDTPAGGSG GAGPKIEEVD

Arabidopsis Description

MED37CProbable mediator of RNA polymerase II transcription subunit 37c [Source:UniProtKB/Swiss-Prot;Acc:Q9LHA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.