Factsheet for TraesCS4B01G205700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 23128297

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G206600.1	Wheat	cytosol	99.39	99.39
HORVU4Hr1G059260.1	Barley	cytosol	98.63	98.63
TraesCS4A01G098600.1	Wheat	cytosol	99.24	97.46
Os03t0277300-01	Rice	plastid	94.37	94.95
Zm00001d047799_P002	Maize	cytosol, extracellular, plasma membrane, plastid	93.91	94.63
EER92466	Sorghum	cytosol	93.76	94.48
KRH24810	Soybean	nucleus	90.26	91.37
KRH29811	Soybean	nucleus	90.26	91.37
VIT_08s0007g00130.t01	Wine grape	cytosol	89.8	90.91
TraesCS1B01G294300.1	Wheat	cytosol, golgi, unclear	89.5	90.74
Solyc04g011440.2.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	89.35	90.17
PGSC0003DMT400071337	Potato	cytosol	89.04	90.14
GSMUA_Achr10P...	Banana	cytosol	66.06	90.04
TraesCS3B01G390700.1	Wheat	cytosol	89.19	89.88
VIT_06s0004g04470.t01	Wine grape	cytosol	89.19	89.88
GSMUA_Achr8P20830_001	Banana	cytosol, plasma membrane	88.58	89.81
TraesCS3B01G390800.1	Wheat	cytosol	84.63	89.68
TraesCS6B01G367800.1	Wheat	golgi, plastid	88.13	89.49
TraesCS2B01G374700.1	Wheat	cytosol	87.98	89.34
TraesCS5B01G087700.4	Wheat	cytosol	87.82	89.18
TraesCS5B01G492500.1	Wheat	cytosol	87.67	88.89
TraesCS4B01G206700.1	Wheat	cytosol	87.82	88.63
TraesCS4B01G142400.1	Wheat	cytosol	89.04	87.44
TraesCS5B01G129700.2	Wheat	cytosol	77.02	81.48
GSMUA_Achr9P03960_001	Banana	cytosol	62.86	80.82
TraesCS6B01G374500.1	Wheat	cytosol	50.53	71.71
TraesCS4B01G206400.1	Wheat	cytosol	62.1	69.39
TraesCS6B01G374400.1	Wheat	cytosol	57.38	68.3
TraesCS6B01G374600.1	Wheat	cytosol	51.9	66.6
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	63.47	62.71
TraesCS2B01G535000.2	Wheat	cytosol	50.53	62.17
TraesCS4B01G206300.1	Wheat	cytosol	58.9	60.66
TraesCS7B01G331400.1	Wheat	endoplasmic reticulum	59.21	58.94
TraesCS7B01G330900.1	Wheat	endoplasmic reticulum	59.36	58.56
TraesCS5B01G298000.1	Wheat	endoplasmic reticulum, nucleus, unclear	59.21	58.23
TraesCS3B01G296300.1	Wheat	cytosol	43.53	55.53
TraesCS4B01G397600.1	Wheat	mitochondrion	45.97	44.61
TraesCS3B01G331400.4	Wheat	mitochondrion	46.27	44.44
TraesCS1B01G151300.1	Wheat	plastid	45.97	44.02
TraesCS5B01G111200.1	Wheat	golgi, plastid	45.21	43.04
TraesCS2B01G125400.1	Wheat	vacuole	42.01	41.75
TraesCS5B01G267900.1	Wheat	peroxisome	46.58	38.01

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
ncoils:Coil	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF323	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS4B01G205700
EnsemblPlants:TraesCS4B01G205700.1	TIGR:cd10233	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:+:437949085..437951192

Molecular Weight (calculated)

71892.4 Da

IEP (calculated)

4.911

GRAVY (calculated)

-0.448

Length

657 amino acids

Sequence
(BLAST)

001: MASKGGNKGE GPAIGIDLGT TYSCVGVWQH DRVEIVANDQ GNRTTPSYVA FTDTERLIGD AAKNQVAMNP TNTVFDAKRL IGRRFSDASV QSDMKMWPFK
101: VVPGAGDKPM IVVTYKGEEK TFSAEEISSM VLTKMREIAE AFLSTTINNA VVTVPAYFND SQRQATKDAG VIAGLNVMRI INEPTAAAIA YGLDKKATST
201: GEKNVLIFDL GGGTFDVSIL TIEEGIFEVK STAGDTHLGG EDFDNRMVNH FVQEFKRKNK KDISGNPRAL RRLRTACERA KRTLSSTAQT TIEIDSLYEG
301: IDFYATITRA RFEELNMDLF RKCMEPVEKC LRDAKMDKTQ IHDIVLVGGS TRIPKVQQLL QDFFNGKELC KSINPDEAVA YGAAVQAAIL SGEGNQKVQD
401: LLLLDVTPLS LGLETAGGVM TTLIPRNTTI PTKKEQVFST YSDNQPGVLI QVYEGERTRT KDNNLLGKFE LSGIPPAPRG VPQITVTFDI DANGILNVSA
501: EDKTTGQKNK ITITNDKGRL SKEEIERMVQ EAEKYKSEDE QVRHKVEARN ALENYAYNMR NTVRDEKIAS KLPAEDKKKI EDSIEDAIKW LDGNQLAEAD
601: EFEDKMKELE NICNPIISKM YQGAGPGGAA GMDEDMPGGG AGTGGGSGAG PKIEEVD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.