Factsheet for Os03t0277300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 18203134
plastid: 21433289
plasma membrane: 27800704
plastid: 27992503

msms PMID: 18203134 doi

G Li, BR Nallamilli, F Tan, Z Peng

Department of Biochemistry and Molecular Biology, Mississippi State University, Mississippi State, MS 39762, USA.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047799_P002	Maize	cytosol, extracellular, plasma membrane, plastid	96.32	96.47
EER92466	Sorghum	cytosol	96.17	96.32
TraesCS4B01G205700.1	Wheat	cytosol, golgi	94.95	94.37
TraesCS4D01G206600.1	Wheat	cytosol	94.95	94.37
HORVU4Hr1G059260.1	Barley	cytosol	94.33	93.76
TraesCS4A01G098600.1	Wheat	cytosol	94.79	92.53
KRH24810	Soybean	nucleus	90.96	91.53
KRH29811	Soybean	nucleus	90.81	91.37
Os05t0460000-01	Rice	cytosol, nucleus, plastid	90.35	91.33
Os01t0840100-01	Rice	nucleus, plasma membrane, plastid	90.51	91.2
Solyc04g011440.2.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	90.2	90.48
Os11t0703900-01	Rice	extracellular, plasma membrane	89.74	90.29
PGSC0003DMT400071337	Potato	cytosol	89.59	90.14
VIT_08s0007g00130.t01	Wine grape	cytosol	89.43	89.98
VIT_06s0004g04470.t01	Wine grape	cytosol	89.74	89.88
GSMUA_Achr8P20830_001	Banana	cytosol, plasma membrane	89.13	89.81
Os03t0821100-01	Rice	plasma membrane	88.97	89.52
Os03t0276500-01	Rice	plasma membrane	88.82	89.23
GSMUA_Achr10P...	Banana	cytosol	65.54	88.8
GSMUA_Achr9P03960_001	Banana	cytosol	63.4	81.02
Os03t0276800-01	Rice	cytosol	59.72	69.64
Os11t0187600-01	Rice	cytosol	48.24	64.42
Os02t0115900-02	Rice	plasma membrane	63.86	62.71
Os03t0710500-00	Rice	extracellular, plasma membrane	59.26	57.85
Os05t0428600-01	Rice	extracellular, plasma membrane	60.64	57.64
Os11t0187500-01	Rice	cytosol, mitochondrion, plastid	50.38	57.02
Os05t0367800-00	Rice	plasma membrane	55.44	54.11
Os08t0197700-00	Rice	plasma membrane	59.88	51.18
Os05t0303000-01	Rice	plastid	33.08	47.06
Os02t0774300-01	Rice	mitochondrion	48.39	46.54
Os03t0113700-01	Rice	mitochondrion	47.47	45.86
Os09t0491772-01	Rice	mitochondrion	47.01	44.88
Os12t0244100-01	Rice	plastid	46.55	43.55

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
EntrezGene:4332420	ProteinID:ABF95267.1	ProteinID:BAS83525.1	ncoils:Coil	ProteinID:EAZ26449.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS
InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EnsemblPlantsGene:Os03g0277300	EnsemblPlants:Os03t0277300-01	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323
UniProt:Q10NA1	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI0000DB45A5	RefSeq:XP_015630928.1
SEG:seg	:	:	:	:	:

Description

HEAT SHOCK PROTEIN 70KDHeat shock protein 70. (Os03t0277300-01)

Coordinates

chr3:-:9411494..9416082

Molecular Weight (calculated)

71638.2 Da

IEP (calculated)

5.056

GRAVY (calculated)

-0.438

Length

653 amino acids

Sequence
(BLAST)

001: MAGNKGEGPA IGIDLGTTYS CVGVWQHDRV EIIANDQGNR TTPSYVAFTD TERLIGDAAK NQVAMNPTNT VFDAKRLIGR RFSDPSVQAD MKMWPFKVVP
101: GPADKPMIVV TYKGEEKKFS AEEISSMVLT KMKEIAEAFL STTIKNAVIT VPAYFNDSQR QATKDAGVIS GLNVMRIINE PTAAAIAYGL DKKAASTGEK
201: NVLIFDLGGG TFDVSILTIE EGIFEVKATA GDTHLGGEDF DNRMVNHFVQ EFKRKHKKDI TGNPRALRRL RTACERAKRT LSSTAQTTIE IDSLYEGIDF
301: YATITRARFE ELNMDLFRRC MEPVEKCLRD AKMDKAQIHD VVLVGGSTRI PKVQQLLQDF FNGKELCKSI NPDEAVAYGA AVQAAILSGE GNQRVQDLLL
401: LDVTPLSLGL ETAGGVMTVL IPRNTTIPTK KEQVFSTYSD NQPGVLIQVY EGERTRTKDN NLLGKFELTG IPPAPRGVPQ INVTFDIDAN GILNVSAEDK
501: TTGKKNKITI TNDKGRLSKE EIERMVQEAE KYKAEDEQVR HKVEARNALE NYAYNMRNTV RDEKIASKLP ADDKKKIEDA IEDAIKWLDG NQLAEADEFE
601: DKMKELESLC NPIISKMYQG GAGGPAGMDE DAPNGSAGTG GGSGAGPKIE EVD

Best Arabidopsis Sequence Match ( AT3G12580.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR YSDPSVQADK SHWPFKVVSG
101: PGEKPMIVVN HKGEEKQFSA EEISSMVLIK MREIAEAFLG SPVKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIT GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSSVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVDAKNALEN YAYNMRNTIK DEKIASKLDA ADKKKIEDAI DQAIEWLDGN QLAEADEFED
601: KMKELESLCN PIIARMYQGA GPDMGGAGGM DDDTPAGGSG GAGPKIEEVD

Arabidopsis Description

MED37CProbable mediator of RNA polymerase II transcription subunit 37c [Source:UniProtKB/Swiss-Prot;Acc:Q9LHA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.