Factsheet for Os05t0367800-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 7
extracellular 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0428600-01	Rice	extracellular, plasma membrane	81.17	79.04
TraesCS7D01G423100.1	Wheat	endoplasmic reticulum	73.69	74.7
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	67.86	74.67
TraesCS7B01G331400.1	Wheat	endoplasmic reticulum	73.54	74.55
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	72.8	74.01
TraesCS7B01G330900.1	Wheat	endoplasmic reticulum	73.54	73.87
HORVU7Hr1G098810.1	Barley	endoplasmic reticulum	73.69	73.36
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	72.35	73.33
TraesCS5B01G298000.1	Wheat	endoplasmic reticulum, nucleus, unclear	72.94	73.05
EES01866	Sorghum	endoplasmic reticulum	72.35	72.56
Os08t0197700-00	Rice	plasma membrane	82.66	72.38
HORVU5Hr1G078400.1	Barley	plasma membrane	72.5	72.28
Os02t0115900-02	Rice	plasma membrane	67.41	67.82
Os03t0710500-00	Rice	extracellular, plasma membrane	65.92	65.92
Os03t0821100-01	Rice	plasma membrane	53.96	55.62
Os03t0277300-01	Rice	plastid	54.11	55.44
Os03t0276500-01	Rice	plasma membrane	53.81	55.38
Os01t0840100-01	Rice	nucleus, plasma membrane, plastid	53.51	55.25
Os05t0460000-01	Rice	cytosol, nucleus, plastid	53.21	55.11
Os11t0703900-01	Rice	extracellular, plasma membrane	53.21	54.85
Os03t0276800-01	Rice	cytosol	45.14	53.93
Os11t0187600-01	Rice	cytosol	37.07	50.72
Os11t0187500-01	Rice	cytosol, mitochondrion, plastid	41.7	48.35
Os05t0303000-01	Rice	plastid	29.9	43.57
Os03t0113700-01	Rice	mitochondrion	43.2	42.75
Os02t0774300-01	Rice	mitochondrion	43.05	42.42
Os09t0491772-01	Rice	mitochondrion	42.15	41.23
Os12t0244100-01	Rice	plastid	42.75	40.97

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	EntrezGene:4338568
ProteinID:AAT38017.1	ProteinID:BAF17253.1	ProteinID:BAS93656.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	EnsemblPlantsGene:Os05g0367800	EnsemblPlants:Os05t0367800-00	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297
ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF317	UniProt:Q6L590	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000376BD5	RefSeq:XP_015638605.1
SEG:seg	:	:	:	:	:

Description

ER chaperone BiP3, Binding protein 3Similar to Luminal binding protein 2 precursor (BiP2) (Heat shock protein 70 homolog 2) (B70) (B-70). (Os05t0367800-00)

Coordinates

chr5:-:17659503..17661606

Molecular Weight (calculated)

72222.5 Da

IEP (calculated)

5.074

GRAVY (calculated)

-0.341

Length

669 amino acids

Sequence
(BLAST)

001: MARGATWTRR LHLHGLFLAV LLLLTLPAGS TAAAGGGGGT VIGIDLGTTY SCVGVYRNGH VEIIANDQGN RITPSWVAFT GGGERLIGEA AKNQAAANPG
101: RTVYDAKRLI GRRFADAEVQ RDMRLLPFAV VDKGGKPHVR VEVRGGDVRL LSPEEVSAMV LARMKETAEA YLGEEVTRAV VTVPAYFNDA QRQATKDAAT
201: IAGLAVERIL NEPTAAALAY GVGKEGAGGK NVLVFDLGGG TFDVSVLAID GGVYEVLATN GDTHLGGEDF DQRVMEHFVE LVRRKHGRDI AGDARALGKL
301: RRECERAKRA LSIQHQVRVE VESLFDGVDL SEPLSRARFE ELNNDLFRKT MAPVRKAMAD ARLSNADIDE IVLVGGSTRI PKVRQLLRDY FGGKQPNQGV
401: NPDEAVAYGA AIQANIVGGD TDNKTRDMVV LDVTPLTLGL ETAGGVMATL IPRNTPVPTK RAQLFSTYKD KQTTVTVKVF EGERSMTRDN RLLGRFDLAG
501: IAPAPRGAPQ IEVAFEVDAD GILSVSAADR ATGRSERITI SGDDRKTSRE EIDRMLGEAE EFADEDRRHR ERAGARNSLE AYVYGVKNAV VGGEMAGAMD
601: GGEKEKVEAA VMEAYEWLDG NQDVGKEEYE EKLRELEDVC NPVMSAVYQR SGGSRRDGDG GGDDDHDEL

Best Arabidopsis Sequence Match ( AT1G09080.1 )
(BLAST)

001: MIFIKENTAK MTRNKAIACL VFLTVLDFLM NIGAALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL

Arabidopsis Description

MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.