Factsheet for HORVU5Hr1G078400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	87.48	96.55
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	93.29	94.85
TraesCS5B01G298000.1	Wheat	endoplasmic reticulum, nucleus, unclear	94.34	94.76
HORVU7Hr1G098810.1	Barley	endoplasmic reticulum	90.91	90.77
EES01866	Sorghum	endoplasmic reticulum	80.33	80.81
Os05t0428600-01	Rice	extracellular, plasma membrane	81.52	79.62
HORVU2Hr1G122760.1	Barley	endoplasmic reticulum	73.47	73.91
Os05t0367800-00	Rice	plasma membrane	72.28	72.5
Os08t0197700-00	Rice	plasma membrane	81.82	71.86
HORVU2Hr1G122800.1	Barley	extracellular, golgi	70.49	71.45
HORVU1Hr1G072220.4	Barley	cytosol	55.14	62.82
HORVU5Hr1G021300.3	Barley	cytosol	58.57	60.74
HORVU5Hr1G113180.1	Barley	cytosol	58.57	60.65
HORVU6Hr1G081460.2	Barley	cytosol, plasma membrane	58.42	60.59
HORVU4Hr1G059390.1	Barley	cytosol	58.57	60.37
HORVU4Hr1G059260.1	Barley	cytosol	59.02	60.27
HORVU2Hr1G112630.2	Barley	cytosol	42.18	55.82
HORVU3Hr1G086500.3	Barley	cytosol, plastid	58.57	55.74
HORVU5Hr1G021310.1	Barley	cytosol	33.53	55.56
HORVU6Hr1G009570.1	Barley	cytosol	34.72	54.19
HORVU4Hr1G059210.1	Barley	cytosol, mitochondrion, plastid	36.21	52.37
HORVU6Hr1G082600.1	Barley	cytosol, mitochondrion	37.41	51.86
HORVU6Hr1G082510.2	Barley	cytosol	36.51	51.47
HORVU6Hr1G094830.1	Barley	cytosol	45.45	50.16
HORVU0Hr1G006930.3	Barley	cytosol	33.53	46.97
HORVU3Hr1G030980.2	Barley	cytosol	41.88	45.47
HORVU4Hr1G012460.2	Barley	cytosol, peroxisome	43.82	44.34
HORVU4Hr1G089090.8	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	43.96	43.57
HORVU5Hr1G073730.1	Barley	plastid	42.32	43.16
HORVU3Hr1G073230.9	Barley	endoplasmic reticulum, golgi	44.56	42.84
HORVU5Hr1G032650.1	Barley	plastid	43.67	42.34
HORVU1Hr1G030790.1	Barley	plastid	44.56	38.33

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	UniProt:A0A287RXA5
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU5Hr1G078400
EnsemblPlants:HORVU5Hr1G078400.1	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000B467224	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:554867376..554869393

Molecular Weight (calculated)

74008.7 Da

IEP (calculated)

4.756

GRAVY (calculated)

-0.434

Length

671 amino acids

Sequence
(BLAST)

001: SKTNQSIEMA RAPTWVFAML VAVAALLLAM PAASAAPTGG DDTGTVIGID LGTTYSCVGV YRNGRVEIIA NDQGNRITPS WVAFADGGER LIGEAAKNQA
101: AANPERTIYD AKRLIGRDFD DAVVQRDIKL LPYSVVDRKG KPHIQVRVKD GDVRVFSPEE VSAMVLTRMK ETAEAYLGEK VTHAVVTVPA YFNDAQRQAT
201: KDAGVIAGLN VLRIVNEPTA AAIAYGIDEK GPEKNVLVFD LGGGTFDVSV LSIDNGVFEV LATNGDTHLG GDDFDQRLMD YFIKLIKRKH GRDITGDLRA
301: LGKLRRECER AKRALSNQHQ VRVEIESLFD GVDFSEPLTR ARFEELNNDL FRKTMVPVKK AMADAGLSKA DIDEIVLVGG STRIPKVQQL LKDYFNGKEP
401: NKGVNPDEAV AYGAAVQASI VSGHVDENTK KMILLDVAPL TLGLETVGGV MTKLIPRNTV VPTKKTQVFT TYQDKQTTVS IMVYEGERSM TKDNRLLGKF
501: ELSGIPPAPR GTPQIEVTFE VDVNGILHVK AADKGTGKSE KITITNEDGR HSQEEIDRMV REAEEFVEED RKVKERVDAR NKLETYVYDI KNTVDGKMAD
601: AMERDDKEKV QDAVREVNEW LDDNREAEKE DYDGKLQELE DVCNPVITAM YQRSGGAPDD NNTEEDDHDE L

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.