Factsheet for TraesCS5A01G298700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G305500.1	Wheat	endoplasmic reticulum	89.85	97.53
TraesCS5B01G298000.1	Wheat	endoplasmic reticulum, nucleus, unclear	96.36	95.21
HORVU5Hr1G078400.1	Barley	plasma membrane	94.85	93.29
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	91.36	91.64
EES01866	Sorghum	endoplasmic reticulum	81.06	80.21
Os05t0428600-01	Rice	extracellular, plasma membrane	82.42	79.18
TraesCS6A01G042600.1	Wheat	golgi	76.82	76.24
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	74.09	73.31
Os05t0367800-00	Rice	plasma membrane	73.33	72.35
Os08t0197700-00	Rice	plasma membrane	82.58	71.34
TraesCS4A01G175100.1	Wheat	cytosol	52.88	62.77
TraesCS1A01G285000.2	Wheat	cytosol, golgi	59.24	60.34
TraesCS5A01G078000.1	Wheat	cytosol, nucleus	59.09	60.28
TraesCS5A01G479300.1	Wheat	golgi	59.09	60.19
TraesCS6A01G337100.4	Wheat	cytosol	58.94	60.12
TraesCS4A01G097900.2	Wheat	cytosol	58.48	58.93
TraesCS4A01G098600.1	Wheat	cytosol	58.79	58.0
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	45.15	55.81
TraesCS6A01G342500.1	Wheat	cytosol	45.45	55.25
TraesCS2A01G507000.2	Wheat	cytosol	40.45	55.05
TraesCS4A01G098200.1	Wheat	cytosol	43.33	52.48
TraesCS6A01G342900.1	Wheat	cytosol	38.79	52.46
TraesCS4A01G098100.1	Wheat	cytosol	46.67	52.38
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	39.55	50.48
TraesCS5A01G268100.1	Wheat	mitochondrion	45.3	43.71
TraesCS1A01G295600.1	Wheat	mitochondrion	45.0	43.48
TraesCS3A01G305100.3	Wheat	mitochondrion	45.0	43.42
TraesCS1A01G133100.2	Wheat	golgi	44.39	42.84
TraesCS3A01G262900.1	Wheat	peroxisome	39.85	42.63
TraesCS5A01G106200.2	Wheat	plastid	43.94	42.03

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	ncoils:Coil
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5A01G298700	EnsemblPlants:TraesCS5A01G298700.1	TIGR:cd10241	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:-:505625923..505628048

Molecular Weight (calculated)

72488.2 Da

IEP (calculated)

4.874

GRAVY (calculated)

-0.397

Length

660 amino acids

Sequence
(BLAST)

001: MARAPMWMFA TLVAALLLVM PAASAAPTGG DAGTVIGIDL GTTYSCVGVY RNGRVEIIAN DQGNRITPSW VAFADGGERL IGEAAKNQAA ANPERTIYDA
101: KRLIGRDFAN AVVQRDIKLL PYSVVDRKGK PHIQVRVKDG DVRVFSPEEV SAMVLSKMKE TAEAYLGEKV KHAVVTVPAY FNDAQRQATK DAGVIAGLNV
201: LRIVNEPTAA AIAYGIDEKG PEKNVLVFDL GGGTFDVSVL SIDNGVFEVL ATNGDTHLGG EDFDQRLMDY FIKLIKRKHG RDISGDLRAL GKLRRECERA
301: KRALSNQHQV RVEIESLFDG VDFSEPLTRA RFEELNNDLF RKTMVPVKKA MADAGLSKAD IDEIVLVGGS TRIPKVQQLL KEYFNGKEPN KGVNPDEAVA
401: YGAAVQASIV SGHVDENTKK MILIDVAPLT LGLETVGGVM TKLIPRNTVV PTKKTQVFTT FQDKQTTVSI KVYEGERSMT KDNRLLGKFD LSGIAPAPRG
501: TPQIEVTFEV DVNGILHVKA ADKGTGKSEK ITITNEGGRH SQEEIDRMVR EAEEFMEEDG KVKERVDARN KLEAYVYDIK NTVDGKMADA MEGDEKEKVQ
601: DAMREVNEWL DDNPEAEKED YGEKLRELED LCNPVISAPY QRSGAAPDDS NTEEDDHDEL

Best Arabidopsis Sequence Match ( AT1G09080.1 )
(BLAST)

001: MIFIKENTAK MTRNKAIACL VFLTVLDFLM NIGAALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL

Arabidopsis Description

MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.