Factsheet for TraesCS6A01G337100.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G317700.1	Wheat	cytosol	100.0	100.0
TraesCS6B01G367800.1	Wheat	golgi, plastid	100.0	100.0
HORVU6Hr1G081460.2	Barley	cytosol, plasma membrane	99.69	99.69
TraesCS5A01G078000.1	Wheat	cytosol, nucleus	99.23	99.23
TraesCS4A01G175100.1	Wheat	cytosol	80.68	93.88
TraesCS5A01G479300.1	Wheat	golgi	93.35	93.21
TraesCS1A01G285000.2	Wheat	cytosol, golgi	91.5	91.36
TraesCS4A01G097900.2	Wheat	cytosol	91.81	90.69
TraesCS4A01G098600.1	Wheat	cytosol	89.34	86.4
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	58.58	70.97
TraesCS6A01G342500.1	Wheat	cytosol	58.58	69.8
TraesCS2A01G507000.2	Wheat	cytosol	51.93	69.28
TraesCS4A01G098100.1	Wheat	cytosol	62.44	68.71
TraesCS4A01G098200.1	Wheat	cytosol	56.57	67.16
TraesCS6A01G342900.1	Wheat	cytosol	49.15	65.16
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	50.39	63.06
TraesCS6A01G042600.1	Wheat	golgi	62.44	60.75
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	60.12	58.94
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	59.35	58.36
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	56.72	55.02
TraesCS3A01G262900.1	Wheat	peroxisome	50.23	52.67
TraesCS1A01G295600.1	Wheat	mitochondrion	46.99	44.51
TraesCS3A01G305100.3	Wheat	mitochondrion	46.99	44.44
TraesCS1A01G133100.2	Wheat	golgi	46.99	44.44
TraesCS5A01G268100.1	Wheat	mitochondrion	46.06	43.57
TraesCS5A01G106200.2	Wheat	plastid	46.21	43.33

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
ncoils:Coil	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF308	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS6A01G337100
EnsemblPlants:TraesCS6A01G337100.4	TIGR:cd10233	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:-:571030236..571033767

Molecular Weight (calculated)

71127.6 Da

IEP (calculated)

4.803

GRAVY (calculated)

-0.409

Length

647 amino acids

Sequence
(BLAST)

001: MAAKGDGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSTVQSDI KLWPFKVVAG
101: PGDKPMINVQ YKGEEKQFAA EEISSMVLIK MREIAEAFLG TTVKNAVVTV PAYFNDSQRQ ATKDAGVIAG INVLRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLFEGIDFY
301: STITRARFEE MNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP RVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERTRTRDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKSEDEEHKK KVESKNALEN YSYNMRNTIK DEKIASKLPA DDKKKIEDAI DAAIQWLDTN QLAEADEFED
601: KMKELEALCN PIIAKMYQGA GADMEGGMDD DTPAASGGAG PKIEEVD

Best Arabidopsis Sequence Match ( AT5G02500.1 )
(BLAST)

001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDSSVQSDM KLWPFKIQAG
101: PADKPMIYVE YKGEEKEFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIT GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLYEGIDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQGAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTTLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVEAKNALEN YAYNMRNTIQ DEKIGEKLPA ADKKKIEDSI EQAIQWLEGN QLAEADEFED
601: KMKELESICN PIIAKMYQGA GGEAGGPGAS GMDDDAPPAS GGAGPKIEEV D

Arabidopsis Description

MED37EProbable mediator of RNA polymerase II transcription subunit 37e [Source:UniProtKB/Swiss-Prot;Acc:P22953]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.