Factsheet for TraesCS6A01G342200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

mitochondrion 2
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G374500.1	Wheat	cytosol	81.46	93.95
TraesCS6D01G322700.1	Wheat	cytosol	74.53	88.64
HORVU6Hr1G082510.2	Barley	cytosol	73.6	82.56
TraesCS6A01G342500.1	Wheat	cytosol	81.46	80.11
TraesCS4A01G098200.1	Wheat	cytosol	74.53	73.03
TraesCS4A01G098100.1	Wheat	cytosol	78.84	71.6
TraesCS2A01G507000.2	Wheat	cytosol	64.61	71.13
TraesCS4A01G175100.1	Wheat	cytosol	70.41	67.63
Os03t0276800-01	Rice	cytosol	69.66	66.43
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	64.23	66.34
TraesCS6A01G342900.1	Wheat	cytosol	58.99	64.55
TraesCS1A01G285000.2	Wheat	cytosol, golgi	71.72	59.1
GSMUA_Achr6P15270_001	Banana	cytosol	50.56	59.08
TraesCS6A01G337100.4	Wheat	cytosol	70.97	58.58
TraesCS5A01G078000.1	Wheat	cytosol, nucleus	70.79	58.42
TraesCS4A01G097900.2	Wheat	cytosol	71.54	58.32
TraesCS5A01G479300.1	Wheat	golgi	69.66	57.41
TraesCS4A01G098600.1	Wheat	cytosol	70.79	56.5
KRH49659	Soybean	endoplasmic reticulum	63.3	53.4
KRH01651	Soybean	cytosol	59.93	53.16
KRH11084	Soybean	endoplasmic reticulum	63.11	52.57
KRH11083	Soybean	cytosol, endoplasmic reticulum	55.81	50.68
KRH01610	Soybean	cytosol, endoplasmic reticulum	61.42	48.74
KRH01609	Soybean	cytosol	61.24	48.59
TraesCS6A01G042600.1	Wheat	golgi	57.3	46.02
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	55.81	45.15
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	55.62	45.14
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	55.62	44.53
TraesCS3A01G262900.1	Wheat	peroxisome	49.81	43.11
KRH70355	Soybean	cytosol	62.92	37.67
KRH21163	Soybean	endoplasmic reticulum	33.71	36.81
TraesCS3A01G305100.3	Wheat	mitochondrion	45.88	35.82
TraesCS1A01G295600.1	Wheat	mitochondrion	45.69	35.72
TraesCS5A01G268100.1	Wheat	mitochondrion	45.32	35.38
TraesCS1A01G133100.2	Wheat	golgi	45.13	35.23
TraesCS5A01G106200.2	Wheat	plastid	44.76	34.64

Protein Annotations

EnsemblPlants:TraesCS6A01G342200.1	EnsemblPlantsGene:TraesCS6A01G342200	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	PANTHER:PTHR19375	PANTHER:PTHR19375:SF311
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS01036	SEG:seg	SUPFAM:SSF100920
SUPFAM:SSF53067	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:574911635..574914703

Molecular Weight (calculated)

58301.8 Da

IEP (calculated)

6.266

GRAVY (calculated)

-0.190

Length

534 amino acids

Sequence
(BLAST)

001: MAAGTKGDGS AIGIDLGTTY SCVAVWRPVH QRVEVIANDQ GNLTTPSCVA FTDTWRLIGD AAMNQAAMNP VNTVFDAKRL IGRRFSEEVQ GDMKLWPFKV
101: ISGRSDRPMI VVKYRGEEKQ FAAEEISSMV LVKMRETAET YLGTTVKDAV ITVPVYFNDS QRQSTLDAGA IAGLNVTRII NEPSAAAIAY GLDDTSANGE
201: AKTVLIFDYG GGTLDISVIK IDNGTFNVKA TSGDTHLGGE DLNNRMVEHF VQDFLKKHKS DLRSNPKALM RLRTACERAK RMLSSTAEAK IEIDSLHDGI
301: DFYATITRAR FEELNLDLFS KCIMHVAKCL GDAEMDKSQV HDVVLVGGST KIPKVQQLLQ DFFHGKKLCK SINPDEAVAY GAAVQAAIHN GQYNQKVNDL
401: VLLDVTPLSL GIELVGGVMS VVIPRNTTIP AKKERGYTTD VDYQTAVPFS VYEGEAGLVK DNNLLGMFNL TGVPPAPRLV PKLNVTFEIN ANGILEVTAE
501: ERPTGNKNSI TITNDKGGLS KQEIDRMVRD ANKY

Best Arabidopsis Sequence Match ( AT1G56410.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDASVQSDM KFWPFKVTPG
101: QADKPMIFVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG SSIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGIKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GDARALRRLR TACERAKRTL SSTAQTTVEV DSLFEGIDFY
301: SPITRAKFEE MNMDLFRKCM EPVMKCLRDS KMDKSMVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGIE TIGGVMTTLI QRNTTIPAKK EQEFTTTVDN QPDVLIQVYE GERARTIDNN ILGQFVLSGI PPAPRGIPQF TVCFDIDSNG ILNVSAEDKA
501: TGKKNKITIT NDKGRLSKDD IEKMVQEAEK YKSEDEEHKK KVEAKNGLEN YAYNVGNTLR DMGEKLPAAD KKKFEDSIEE VIQWLDDNQL AEADEFEHKM
601: KELESVWSTI ITKMYQG

Arabidopsis Description

HSP70-18Heat shock 70 kDa protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.