Factsheet for TraesCS5A01G078000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 26579155

msms PMID: 26579155 doi

T Bonnot, E Bancel, C Chambon, J Boudet, G Branlard, P Martre

Metabolism Exploration Platform Proteomic Component, Institut National de la Recherche Agronomique Saint-Genès Champanelle, France., UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Institut National de la Recherche Agronomique Clermont-Ferrand, France ; UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Blaise Pascal University Aubière, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G093900.1	Wheat	cytosol, mitochondrion, nucleus	99.69	99.69
TraesCS5B01G087700.4	Wheat	cytosol	99.54	99.54
HORVU5Hr1G021300.3	Barley	cytosol	99.54	99.54
HORVU5Hr1G021310.1	Barley	cytosol	62.13	99.26
TraesCS6A01G337100.4	Wheat	cytosol	99.23	99.23
TraesCS4A01G175100.1	Wheat	cytosol	80.53	93.7
TraesCS5A01G479300.1	Wheat	golgi	92.74	92.59
TraesCS1A01G285000.2	Wheat	cytosol, golgi	91.19	91.05
TraesCS4A01G097900.2	Wheat	cytosol	91.34	90.23
TraesCS5B01G129700.2	Wheat	cytosol	84.54	88.08
TraesCS4A01G098600.1	Wheat	cytosol	88.87	85.95
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	58.42	70.79
TraesCS6A01G342500.1	Wheat	cytosol	58.42	69.61
TraesCS2A01G507000.2	Wheat	cytosol	51.93	69.28
TraesCS4A01G098100.1	Wheat	cytosol	62.29	68.54
TraesCS4A01G098200.1	Wheat	cytosol	56.41	66.97
TraesCS6A01G342900.1	Wheat	cytosol	49.15	65.16
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	50.23	62.86
TraesCS6A01G042600.1	Wheat	golgi	62.44	60.75
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	60.28	59.09
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	59.51	58.51
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	56.88	55.17
TraesCS3A01G262900.1	Wheat	peroxisome	50.08	52.51
TraesCS1A01G295600.1	Wheat	mitochondrion	47.14	44.66
TraesCS1A01G133100.2	Wheat	golgi	47.14	44.59
TraesCS3A01G305100.3	Wheat	mitochondrion	47.14	44.59
TraesCS5A01G268100.1	Wheat	mitochondrion	46.21	43.71
TraesCS5A01G106200.2	Wheat	plastid	46.21	43.33

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
ncoils:Coil	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF308	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS5A01G078000
EnsemblPlants:TraesCS5A01G078000.1	TIGR:cd10233	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:+:95565480..95569011

Molecular Weight (calculated)

71082.5 Da

IEP (calculated)

4.803

GRAVY (calculated)

-0.402

Length

647 amino acids

Sequence
(BLAST)

001: MAAKGDGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSTVQSDI KLWPFKVVAG
101: PGDKPMINVQ YKGEEKQFAA EEISSMVLIK MREIAEAFLG STVKNAVVTV PAYFNDSQRQ ATKDAGVIAG INVLRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVLE FKRKNKKDIS GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLFEGIDFY
301: STITRARFEE MNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERTRTRDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKSEDEEHKK KVESKNALEN YSYNMRNTIK DEKVASKLPA DDKKKIEDAI DAAIQWLDTN QLAEADEFED
601: KMKELEALCN PIIAKMYQGA GADMEGGMDD DTPAASGGPG PKIEEVD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.