Factsheet for TraesCS2A01G507000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G112630.2	Barley	cytosol	79.59	76.13
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	72.99	68.47
TraesCS6A01G342500.1	Wheat	cytosol	72.37	64.64
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	71.13	64.61
TraesCS4A01G098100.1	Wheat	cytosol	77.11	63.61
TraesCS4A01G098200.1	Wheat	cytosol	70.93	63.12
TraesCS4A01G175100.1	Wheat	cytosol	68.25	59.53
Os03t0276800-01	Rice	cytosol	68.45	59.29
TraesCS6A01G342900.1	Wheat	cytosol	57.73	57.38
TraesCS5A01G078000.1	Wheat	cytosol, nucleus	69.28	51.93
TraesCS6A01G337100.4	Wheat	cytosol	69.28	51.93
TraesCS1A01G285000.2	Wheat	cytosol, golgi	68.66	51.39
TraesCS4A01G097900.2	Wheat	cytosol	68.87	50.99
GSMUA_Achr6P15270_001	Banana	cytosol	48.04	50.98
TraesCS5A01G479300.1	Wheat	golgi	68.04	50.93
TraesCS4A01G098600.1	Wheat	cytosol	68.66	49.78
KRH49659	Soybean	endoplasmic reticulum	61.86	47.39
KRH01651	Soybean	cytosol	58.76	47.34
KRH11084	Soybean	endoplasmic reticulum	62.27	47.11
KRH01610	Soybean	cytosol, endoplasmic reticulum	59.79	43.09
KRH11083	Soybean	cytosol, endoplasmic reticulum	52.16	43.03
KRH01609	Soybean	cytosol	59.38	42.79
TraesCS6A01G042600.1	Wheat	golgi	57.94	42.26
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	55.26	40.73
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	55.67	40.48
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	55.05	40.45
TraesCS3A01G262900.1	Wheat	peroxisome	47.22	37.12
KRH70355	Soybean	cytosol	63.09	34.3
TraesCS5A01G268100.1	Wheat	mitochondrion	47.22	33.48
TraesCS1A01G295600.1	Wheat	mitochondrion	46.39	32.94
TraesCS3A01G305100.3	Wheat	mitochondrion	46.19	32.75
TraesCS1A01G133100.2	Wheat	golgi	45.36	32.16
TraesCS5A01G106200.2	Wheat	plastid	44.12	31.01
KRH21163	Soybean	endoplasmic reticulum	28.87	28.63

Protein Annotations

EnsemblPlants:TraesCS2A01G507000.2	EnsemblPlantsGene:TraesCS2A01G507000	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	PANTHER:PTHR19375	PANTHER:PTHR19375:SF311	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	SEG:seg	SUPFAM:SSF100920
SUPFAM:SSF53067	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:734593704..734596758

Molecular Weight (calculated)

52789.7 Da

IEP (calculated)

6.207

GRAVY (calculated)

-0.168

Length

485 amino acids

Sequence
(BLAST)

001: MGGDGPAIGV DLGTTYSCVA VWRPSHNRVE VIPNDQGNLT TPSRVAFTDA WRLIGDAALN QAARNPVNTV FDAKRLIGRK FSDASVQGDM KLWPFKVVSG
101: PCDRPMIVVQ YMGQEKKFTA EEISSMILVK MKETAEAYLG TSVKNTVITV PVYFNDSQRQ ATIDAGVIAG LNVMCIINEP SAAAIAYGLD KMSGSSEAKT
201: VLIFDLGGGT MDVSIISVQN GVFTVKATSG GTHLGGQDLN NRMELNMDLF RKCIEHVEKC LRDAKMDKSR IHDVVLVGGS TRIPKVQQLL QDFFDGKTLC
301: KSINPDEAVA YGAAVQAAAL SGECDRKGQD FLLLDVTPLS LGVEVVPGIM SVLVPRNSTI PVKREGPYTT KFDNQTSVLI KVYEGEGELT KDNRLLGTFA
401: LTGITPALRG VPKLIETIEV EANGILKVTA EDITTGNKKS INITTDKGGL SKEEIERMVK DAEKYRSEDR KRIMKMKKED EEGWL

Best Arabidopsis Sequence Match ( AT5G02500.1 )
(BLAST)

001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDSSVQSDM KLWPFKIQAG
101: PADKPMIYVE YKGEEKEFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIT GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLYEGIDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQGAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTTLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVEAKNALEN YAYNMRNTIQ DEKIGEKLPA ADKKKIEDSI EQAIQWLEGN QLAEADEFED
601: KMKELESICN PIIAKMYQGA GGEAGGPGAS GMDDDAPPAS GGAGPKIEEV D

Arabidopsis Description

MED37EProbable mediator of RNA polymerase II transcription subunit 37e [Source:UniProtKB/Swiss-Prot;Acc:P22953]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.