Factsheet for TraesCS5A01G479300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 23128297
golgi: 25769308
mitochondrion: 26136264
plasma membrane: 26897580
nucleus: 28628250

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 26136264 doi

S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma

College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.

msms PMID: 28628250 doi

T Bonnot, E Bancel, D Alvarez, M Davanture, J Boudet, M Pailloux, M Zivy, C Ravel, P Martre

LIMOS, CNRS, Université Blaise Pascal, Aubière, 63173, France., UMR GDEC, INRA, Université Clermont Auvergne, 5 chemin de Beaulieu, Clermont-Ferrand, 63039, France., UMR GQE, INRA, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Gif-sur-Yvette, 91190, France.

msms PMID: 26897580 doi

Y Shen, J Du, L Yue, X Zhan

College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province, 210095, People's Republic of China., College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province, 210095, People's Republic of China. xhzhan@njau.edu.cn.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G492900.2	Wheat	cytosol	100.0	100.0
TraesCS5B01G492500.1	Wheat	cytosol	99.85	99.85
HORVU5Hr1G113180.1	Barley	cytosol	99.69	99.69
Os03t0821100-01	Rice	plasma membrane	96.45	96.3
TraesCS6A01G337100.4	Wheat	cytosol	93.21	93.35
VIT_06s0004g04510.t01	Wine grape	cytosol, extracellular	92.9	92.9
TraesCS5A01G078000.1	Wheat	cytosol, nucleus	92.59	92.74
TraesCS4A01G175100.1	Wheat	cytosol	79.48	92.63
VIT_13s0019g01430.t01	Wine grape	cytosol	92.28	92.0
PGSC0003DMT400023039	Potato	cytosol, extracellular	91.98	91.83
Solyc09g010630.2.1	Tomato	extracellular	91.98	91.83
KRH19702	Soybean	endoplasmic reticulum	89.2	91.46
TraesCS1A01G285000.2	Wheat	cytosol, golgi	90.74	90.74
TraesCS4A01G097900.2	Wheat	cytosol	91.67	90.69
KRH67530	Soybean	endoplasmic reticulum, nucleus	91.05	90.35
KRG95806	Soybean	nucleus	90.74	89.91
GSMUA_Achr7P15160_001	Banana	cytosol	59.72	89.58
TraesCS4A01G098600.1	Wheat	cytosol	88.73	85.95
TraesCS6A01G342200.1	Wheat	cytosol, peroxisome, plastid	57.41	69.66
TraesCS6A01G342500.1	Wheat	cytosol	57.56	68.69
TraesCS2A01G507000.2	Wheat	cytosol	50.93	68.04
TraesCS4A01G098100.1	Wheat	cytosol	61.57	67.86
TraesCS4A01G098200.1	Wheat	cytosol	55.86	66.42
TraesCS6A01G342900.1	Wheat	cytosol	48.3	64.14
TraesCS2A01G506900.1	Wheat	golgi, plastid, unclear	50.46	63.25
TraesCS6A01G042600.1	Wheat	golgi	62.81	61.2
TraesCS7A01G430600.1	Wheat	endoplasmic reticulum	60.03	59.12
TraesCS5A01G298700.1	Wheat	endoplasmic reticulum	60.19	59.09
TraesCS2A01G585600.1	Wheat	endoplasmic reticulum	56.64	55.02
TraesCS3A01G262900.1	Wheat	peroxisome	48.77	51.22
TraesCS1A01G295600.1	Wheat	mitochondrion	47.38	44.95
TraesCS3A01G305100.3	Wheat	mitochondrion	47.22	44.74
TraesCS5A01G268100.1	Wheat	mitochondrion	46.91	44.44
TraesCS1A01G133100.2	Wheat	golgi	46.3	43.86
TraesCS5A01G106200.2	Wheat	plastid	45.99	43.19

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
ncoils:Coil	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036
PANTHER:PTHR19375	PANTHER:PTHR19375:SF327	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS5A01G479300
EnsemblPlants:TraesCS5A01G479300.1	TIGR:cd10233	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:+:652357716..652362145

Molecular Weight (calculated)

71198.8 Da

IEP (calculated)

4.827

GRAVY (calculated)

-0.394

Length

648 amino acids

Sequence
(BLAST)

001: MAPTKGEGPA IGIDLGTTYS CVGVWQHDRV EIIANDQGNR TTPSYVAFTD SERLIGDAAK NQVAMNPINT VFDAKRLIGR RFADAPVQSD IKMWPYKVIP
101: GPADKPMIVV QYKGEDKQFS AEEISSMVLI KMREIAEAYL GVTIKNAVVT VPAYFNDSQR QATKDAGVIA GLNVMRIINE PTAAAIAYGL DKKATSVGEK
201: NVLIFDLGGG TFDVSLLTIE EGIFEVKATA GDTHLGGEDF DNRMVNHFVQ EFKRKHKKDI SGNPRSLRRL RTSCERAKRT LSSTAQTTIE IDSLFEGVDF
301: YSTITRARFE ELNMDLFRKC MEPVEKCLRD AKMDKSTIHD VVLVGGSTRI PRVQQLLQDF FNGKELCKSI NPDEAVAYGA AVQAAILSGE GNEKVQDLLL
401: LDVTPLSLGL ETAGGVMTVL ITRNTTIPTK KEQVFSTYSD NQPGVLIQVF EGERTRTRDN NLLGKFELSG IPPAPRGVPQ ITVCFDIDAN GILNVSAEDK
501: TTGQKNKITI TNDKGRLSKD DIEKMVQDAE KYKSEDEEHK KKVDAKNSLE NYAYNMRNTI QDEKIASKLP ADDKKKIEDA VDAAIQWLDA NQLGEVDEFE
601: DKMKELEGLC NPIIAKMYQG AGADMPGGMD EDAPAASGGA GPKIEEVD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.