Factsheet for GSMUA_Achr10P00900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P15160_001	Banana	cytosol	84.02	93.75
KRH24810	Soybean	nucleus	94.81	70.42
GSMUA_Achr8P20830_001	Banana	cytosol, plasma membrane	94.4	70.22
KRH29811	Soybean	nucleus	94.4	70.11
GSMUA_Achr9P03960_001	Banana	cytosol	72.41	68.3
Zm00001d047799_P002	Maize	cytosol, extracellular, plasma membrane, plastid	89.42	66.1
TraesCS4D01G206600.1	Wheat	cytosol	90.04	66.06
TraesCS4B01G205700.1	Wheat	cytosol, golgi	90.04	66.06
EER92466	Sorghum	cytosol	89.21	65.95
HORVU4Hr1G059260.1	Barley	cytosol	89.83	65.91
Os03t0277300-01	Rice	plastid	88.8	65.54
TraesCS4A01G098600.1	Wheat	cytosol	90.04	64.87
GSMUA_Achr6P15270_001	Banana	cytosol	61.0	64.33
GSMUA_Achr5P04580_001	Banana	endoplasmic reticulum	64.73	57.67
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	57.68	45.57
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	56.02	44.93
GSMUA_Achr4P11940_001	Banana	cytosol	61.62	41.14
GSMUA_Achr3P12480_001	Banana	mitochondrion	42.95	33.88
GSMUA_Achr4P19830_001	Banana	mitochondrion	47.51	33.63
GSMUA_Achr6P28370_001	Banana	plastid	42.95	32.24
GSMUA_Achr9P07750_001	Banana	plastid	42.12	31.57
GSMUA_Achr5P10770_001	Banana	cytosol	47.51	31.03
GSMUA_Achr6P36350_001	Banana	mitochondrion	33.2	30.25
GSMUA_Achr6P12370_001	Banana	plastid	43.57	16.07

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSMUA_Achr10G00900_001	EnsemblPlants:GSMUA_Achr10P00900_001
EnsemblPlants:GSMUA_Achr10T00900_001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	UniProt:M0REB7	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00329	PANTHER:PTHR19375
PANTHER:PTHR19375:SF308	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI000294FC83	SEG:seg

Description

Heat shock cognate 70 kDa protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G00900_001]

Coordinates

chr10:-:1502679..1506701

Molecular Weight (calculated)

53188.2 Da

IEP (calculated)

4.807

GRAVY (calculated)

-0.461

Length

482 amino acids

Sequence
(BLAST)

001: MNPTNTVFDA KRLIGRRYSD ASVQSDIKLW PFKVVPGPGD KPMIIVQYRG EDKQFSAEEI SSMVLIKMKE IAEAYLGSTI KNAVVTVPAY FNDSQRQATK
101: DAGVIAGLNV MRIINEPTAA AIAYGLDKKA SSVGEKNVLI FDLGGGTFDV SLLTIEEGIF EVKATAGDTH LGGEDFDNRM VNHFVQEFKR KNKKDISGNP
201: RALRRLRTAC ERAKRTLSST AQTTIEIDSL YEGIDFYSTI TRARFEELNM DLFRKCMEPV EKCLRDAKMD KSSVHDVVLV GGSTRIPKAA ILSGEGNEKV
301: FSTYSDNQPG VLIQVYEGER TRTRDNNLLG KFELSGIPPA PRGVPQITVC FDIDANGILN VSAEDKTTGQ KNKITITNDK GRLSKEEIEN MVQEAEKYKA
401: EDEEHKKKKI EDAIEQAIQW LDGNQLAEAD EFEDKMKELE SICNPIIAKM YQGAGADMAG EMDDDVPAAG GSGAGPKIEE VD

Best Arabidopsis Sequence Match ( AT3G12580.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR YSDPSVQADK SHWPFKVVSG
101: PGEKPMIVVN HKGEEKQFSA EEISSMVLIK MREIAEAFLG SPVKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIT GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSSVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVDAKNALEN YAYNMRNTIK DEKIASKLDA ADKKKIEDAI DQAIEWLDGN QLAEADEFED
601: KMKELESLCN PIIARMYQGA GPDMGGAGGM DDDTPAGGSG GAGPKIEEVD

Arabidopsis Description

MED37CProbable mediator of RNA polymerase II transcription subunit 37c [Source:UniProtKB/Swiss-Prot;Acc:Q9LHA8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.