Factsheet for GSMUA_Achr4P11940_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	79.5	95.51
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	80.61	95.41
KRH41370	Soybean	endoplasmic reticulum	85.73	92.8
KRH60086	Soybean	endoplasmic reticulum	85.73	92.66
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	85.32	92.35
Zm00001d014993_P001	Maize	endoplasmic reticulum	84.63	92.16
Zm00001d054043_P007	Maize	endoplasmic reticulum	84.49	92.01
Os02t0115900-02	Rice	plasma membrane	84.63	91.88
TraesCS6D01G049100.1	Wheat	golgi	83.93	91.13
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	83.93	91.13
TraesCS6A01G042600.1	Wheat	golgi	83.93	91.13
Solyc08g082820.2.1	Tomato	extracellular	83.8	90.84
PGSC0003DMT400031937	Potato	extracellular	83.1	89.95
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	82.96	89.81
PGSC0003DMT400047710	Potato	endoplasmic reticulum	82.13	88.77
Solyc03g082920.2.1	Tomato	nucleus, plastid	81.99	88.76
Bra028521.1-P	Field mustard	endoplasmic reticulum	81.58	88.57
CDX67525	Canola	endoplasmic reticulum	70.78	88.56
KRH60091	Soybean	nucleus	85.87	88.45
AT5G28540.1	Thale cress	endoplasmic reticulum	81.86	88.34
CDY63497	Canola	endoplasmic reticulum	78.53	88.32
CDY46766	Canola	endoplasmic reticulum	78.12	87.85
CDX77423	Canola	cytosol, endoplasmic reticulum	78.12	87.85
Bra022819.1-P	Field mustard	endoplasmic reticulum	81.3	87.74
Solyc06g052050.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	75.21	87.72
CDX79726	Canola	endoplasmic reticulum	77.98	87.69
Bra015047.1-P	Field mustard	endoplasmic reticulum	80.89	87.69
KRH41372	Soybean	endoplasmic reticulum	85.87	87.57
CDY23972	Canola	endoplasmic reticulum	77.84	87.54
CDX84809	Canola	endoplasmic reticulum	77.84	87.54
AT5G42020.3	Thale cress	endoplasmic reticulum	81.58	87.52
CDY13371	Canola	cytosol, endoplasmic reticulum	81.58	87.52
KXG29291	Sorghum	plasma membrane	81.72	87.02
Bra023110.1-P	Field mustard	endoplasmic reticulum	76.32	85.83
GSMUA_Achr8P20830_001	Banana	cytosol, plasma membrane	57.34	63.89
GSMUA_Achr5P10770_001	Banana	cytosol	65.1	63.69
GSMUA_Achr6P15270_001	Banana	cytosol	40.3	63.68
GSMUA_Achr10P...	Banana	cytosol	41.14	61.62
GSMUA_Achr7P15160_001	Banana	cytosol	36.01	60.19
GSMUA_Achr9P03960_001	Banana	cytosol	40.86	57.73
GSMUA_Achr5P04580_001	Banana	endoplasmic reticulum	41.55	55.45
GSMUA_Achr3P12480_001	Banana	mitochondrion	41.97	49.59
GSMUA_Achr6P36350_001	Banana	mitochondrion	35.18	48.02
GSMUA_Achr6P28370_001	Banana	plastid	42.52	47.82
GSMUA_Achr4P19830_001	Banana	mitochondrion	44.88	47.58
GSMUA_Achr9P07750_001	Banana	plastid	41.0	46.03
GSMUA_Achr6P12370_001	Banana	plastid	40.86	22.57

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSMUA_Achr4G11940_001	EnsemblPlants:GSMUA_Achr4P11940_001
EnsemblPlants:GSMUA_Achr4T11940_001	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	UniProt:M0SN59	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329
ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067
UniParc:UPI0002963A65	SEG:seg	:	:	:	:

Description

Luminal-binding protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G11940_001]

Coordinates

chr4:+:8715660..8719558

Molecular Weight (calculated)

79515.8 Da

IEP (calculated)

4.840

GRAVY (calculated)

-0.402

Length

722 amino acids

Sequence
(BLAST)

001: MFVSLPVVET DLDCSSSPTP NPLYITVEAP SKVLLIEREC FIGRFGGVEA SRRGATMGSS SRNRGSMILL GLLVAGSLFA FSVAKEEATK LGTVIGIDLG
101: TTYSCVGVYK NGHVEIIAND QGNRITPSWV AFTDSERLIG EAAKNLAAVN PERTIFDVKR LIGRKFEDKE VQRDMKLVPY KIVNKDGKPY IQVKIKDGEV
201: KVFSPEEISA MVLTKMKETA EAFLGKKIKD AVVTVPAYFN DAQRQATKDA GIIAGLNVAR IINEPTAAAI AYGLDKKGGE KNILVFDLGG GTFDVSILTI
301: DNGVFEVLAT NGDTHLGGED FDQRIMEYFI KLIKKKHGKD ISKDNRALGK LRRECERAKR ALSNQHQVRV EIESLYEGLD FSEPLTRARF EELNNDLFRK
401: TMGPVKKAME DAGLEKHQID EIVLVGGSTR IPKVQQLLKD YFDGKEPNKG VNPDEAVAYG AAVQGSILSG EGGEETKDIL LLDVAPLTLG IETVGGVMTK
501: LIPRNTVIPT KKSQVFTTYQ DQQTIVSIQV FEGERSLTKD CRLLGKFDLS GIPPAPRGTP QIEVTFEVDA NGILNVKAED KGTGKSEKIT ITNEKGRLSQ
601: EEIDRMVREA EEFAEEDRKV KEKIDARNQL ETYVYNMKNT VNEKDKLADK IENEEKEKIE AALKDALEWL DDNQSAEKED YEEKLKEVEA VCSPIISAVY
701: QRSGGAPGGS DGGDEDDSHD EL

Best Arabidopsis Sequence Match ( AT5G42020.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFAFSTAKEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDLSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLTGVPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVSDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GAGGESSTEE EDESHDEL

Arabidopsis Description

BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.