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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 8
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:endoplasmic reticulum
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum, nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G28540.1 Thale cress endoplasmic reticulum 95.84 96.41
CDY63497 Canola endoplasmic reticulum 90.94 95.33
CDX79726 Canola endoplasmic reticulum 90.79 95.17
CDX77423 Canola cytosol, endoplasmic reticulum 90.79 95.17
Bra022819.1-P Field mustard endoplasmic reticulum 94.5 95.07
CDY23972 Canola endoplasmic reticulum 90.64 95.02
CDX84809 Canola endoplasmic reticulum 90.64 95.02
Bra028521.1-P Field mustard endoplasmic reticulum 93.76 94.89
CDY46766 Canola endoplasmic reticulum 90.49 94.86
CDX67525 Canola endoplasmic reticulum 80.98 94.45
Bra015047.1-P Field mustard endoplasmic reticulum 92.87 93.84
Bra023110.1-P Field mustard endoplasmic reticulum 89.3 93.61
CDY13371 Canola cytosol, endoplasmic reticulum 93.46 93.46
KRH41370 Soybean endoplasmic reticulum 89.75 90.55
KRH60086 Soybean endoplasmic reticulum 89.6 90.27
PGSC0003DMT400031937 Potato extracellular 88.86 89.66
VIT_02s0025g02140.t01 Wine grape endoplasmic reticulum 88.86 89.66
PGSC0003DMT400047710 Potato endoplasmic reticulum 88.71 89.37
TraesCS6A01G042600.1 Wheat golgi 87.96 89.02
Os02t0115900-02 Rice plasma membrane 87.82 88.87
TraesCS6B01G058300.1 Wheat endoplasmic reticulum 87.82 88.87
TraesCS6D01G049100.1 Wheat golgi 87.82 88.87
VIT_16s0098g01580.t01 Wine grape endoplasmic reticulum 87.52 88.31
Zm00001d014993_P001 Maize endoplasmic reticulum 86.78 88.08
Zm00001d054043_P007 Maize endoplasmic reticulum 86.78 88.08
Solyc06g052050.2.1 Tomato endoplasmic reticulum, nucleus, unclear 80.83 87.88
GSMUA_Achr9P23710_001 Banana endoplasmic reticulum 79.64 87.87
GSMUA_Achr3P27250_001 Banana endoplasmic reticulum 78.16 87.52
KRH60091 Soybean nucleus 88.86 85.31
KXG29291 Sorghum plasma membrane 84.7 84.07
KRH41372 Soybean endoplasmic reticulum 88.41 84.04
GSMUA_Achr4P11940_001 Banana cytosol 87.52 81.58
AT1G09080.1 Thale cress endoplasmic reticulum 76.52 76.3
AT3G09440.2 Thale cress cytosol 61.66 63.94
AT1G56410.1 Thale cress cytosol 57.65 62.88
AT5G02500.1 Thale cress cytosol 60.77 62.83
AT5G02490.1 Thale cress cytosol 60.92 62.79
AT3G12580.1 Thale cress cytosol 60.48 62.62
AT1G16030.1 Thale cress cytosol 58.99 61.46
GSMUA_Achr5P10770_001 Banana cytosol 66.57 60.7
AT4G37910.1 Thale cress mitochondrion 48.14 47.51
AT5G09590.1 Thale cress mitochondrion 47.99 47.36
AT4G24280.1 Thale cress plastid 45.77 42.9
AT5G49910.1 Thale cress plastid 45.32 42.48
Protein Annotations
Gene3D:1.20.1270.10Gene3D:2.60.34.10Gene3D:3.30.420.40Gene3D:3.90.640.10MapMan:35.1EntrezGene:834207
UniProt:A0A1P8BF32ProteinID:ANM70194.1ArrayExpress:AT5G42020EnsemblPlantsGene:AT5G42020RefSeq:AT5G42020TAIR:AT5G42020
RefSeq:AT5G42020-TAIR-GEnsemblPlants:AT5G42020.3Unigene:At.49118Symbol:BIPncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sfInterPro:Heat_shock_70_CS
InterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048RefSeq:NP_001331824.1PFAM:PF00012PRINTS:PR00301
ScanProsite:PS00297ScanProsite:PS00329ScanProsite:PS01036PANTHER:PTHR19375PANTHER:PTHR19375:SF317SUPFAM:SSF100920
SUPFAM:SSF100934SUPFAM:SSF53067UniParc:UPI00084938F0SEG:seg::
Description
BIPHeat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT5G42020]
Coordinates
chr5:-:16807404..16810646
Molecular Weight (calculated)
74379.3 Da
IEP (calculated)
4.817
GRAVY (calculated)
-0.470
Length
673 amino acids
Sequence
(BLAST)
001: MCSLFLDLNV FVYNVVLQFH DLKGCLFAFS TAKEEATKLG SVIGIDLGTT YSCVGVYKNG HVEIIANDQG NRITPSWVGF TDSERLIGEA AKNQAAVNPE
101: RTVFDVKRLI GRKFEDKEVQ KDRKLVPYQI VNKDGKPYIQ VKIKDGETKV FSPEEISAMI LTKMKETAEA YLGKKIKDAV VTVPAYFNDA QRQATKDAGV
201: IAGLNVARII NEPTAAAIAY GLDKKGGEKN ILVFDLGGGT FDVSVLTIDN GVFEVLSTNG DTHLGGEDFD HRIMEYFIKL IKKKHQKDIS KDNKALGKLR
301: RECERAKRAL SSQHQVRVEI ESLFDGVDLS EPLTRARFEE LNNDLFRKTM GPVKKAMDDA GLQKSQIDEI VLVGGSTRIP KVQQLLKDFF EGKEPNKGVN
401: PDEAVAYGAA VQGGILSGEG GDETKDILLL DVAPLTLGIE TVGGVMTKLI PRNTVIPTKK SQVFTTYQDQ QTTVSIQVFE GERSLTKDCR LLGKFDLTGV
501: PPAPRGTPQI EVTFEVDANG ILNVKAEDKA SGKSEKITIT NEKGRLSQEE IDRMVKEAEE FAEEDKKVKE KIDARNALET YVYNMKNQVS DKDKLADKLE
601: GDEKEKIEAA TKEALEWLDE NQNSEKEEYD EKLKEVEAVC NPIITAVYQR SGGAPGAGGE SSTEEEDESH DEL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.