Factsheet for Bra022819.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
endoplasmic reticulum 8
extracellular 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84809	Canola	endoplasmic reticulum	95.81	99.84
CDY23972	Canola	endoplasmic reticulum	95.81	99.84
Bra023110.1-P	Field mustard	endoplasmic reticulum	93.27	97.2
Bra015047.1-P	Field mustard	endoplasmic reticulum	96.71	97.15
AT5G28540.1	Thale cress	endoplasmic reticulum	97.01	97.01
Bra028521.1-P	Field mustard	endoplasmic reticulum	95.96	96.54
AT5G42020.3	Thale cress	endoplasmic reticulum	95.07	94.5
KRH41370	Soybean	endoplasmic reticulum	91.03	91.3
KRH60086	Soybean	endoplasmic reticulum	90.88	91.02
VIT_02s0025g02140.t01	Wine grape	endoplasmic reticulum	89.99	90.25
PGSC0003DMT400047710	Potato	endoplasmic reticulum	89.99	90.12
PGSC0003DMT400031937	Potato	extracellular	89.69	89.95
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	88.49	89.02
TraesCS6A01G042600.1	Wheat	golgi	88.49	89.02
TraesCS6D01G049100.1	Wheat	golgi	88.49	89.02
Os02t0115900-02	Rice	plasma membrane	88.34	88.87
VIT_16s0098g01580.t01	Wine grape	endoplasmic reticulum	88.49	88.76
GSMUA_Achr9P23710_001	Banana	endoplasmic reticulum	80.57	88.36
Zm00001d014993_P001	Maize	endoplasmic reticulum	87.44	88.24
Zm00001d054043_P007	Maize	endoplasmic reticulum	87.14	87.93
GSMUA_Achr3P27250_001	Banana	endoplasmic reticulum	78.62	87.52
Solyc06g052050.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	80.42	86.91
KRH60091	Soybean	nucleus	90.28	86.16
KRH41372	Soybean	endoplasmic reticulum	89.24	84.32
KXG29291	Sorghum	plasma membrane	84.9	83.78
GSMUA_Achr4P11940_001	Banana	cytosol	87.74	81.3
Bra031657.1-P	Field mustard	endoplasmic reticulum	75.93	75.48
Bra024699.1-P	Field mustard	cytosol	56.65	64.9
Bra001457.1-P	Field mustard	cytosol	56.35	64.12
Bra013046.1-P	Field mustard	cytosol	52.32	64.1
Bra009583.1-P	Field mustard	cytosol	56.95	63.29
Bra035470.1-P	Field mustard	cytosol	56.35	63.26
Bra038734.1-P	Field mustard	cytosol	60.69	62.46
Bra026084.1-P	Field mustard	cytosol	60.39	62.44
Bra035909.1-P	Field mustard	cytosol	53.36	62.41
Bra016644.1-P	Field mustard	cytosol	59.19	60.92
GSMUA_Achr5P10770_001	Banana	cytosol	67.12	60.84
Bra009584.1-P	Field mustard	cytosol	48.43	58.59
Bra018725.1-P	Field mustard	cytosol	30.04	58.26
Bra002461.1-P	Field mustard	cytosol	37.97	47.83
Bra006027.1-P	Field mustard	mitochondrion	47.98	47.14
Bra028628.1-P	Field mustard	mitochondrion	47.83	47.06
Bra011794.1-P	Field mustard	mitochondrion	47.38	46.48
Bra010620.1-P	Field mustard	mitochondrion	46.34	45.86
Bra013786.1-P	Field mustard	plastid	46.04	43.32
Bra019231.1-P	Field mustard	plastid	45.74	43.1
Bra010498.1-P	Field mustard	plastid	45.89	42.82

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	EnsemblPlantsGene:Bra022819
EnsemblPlants:Bra022819.1	EnsemblPlants:Bra022819.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
InterPro:IPR029048	UniProt:M4E219	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329
ScanProsite:PS01036	PFscan:PS51257	PANTHER:PTHR19375	PANTHER:PTHR19375:SF317	SUPFAM:SSF100920	SUPFAM:SSF100934
SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025402AA	SEG:seg	:

Description

AT5G42020 (E=0.0) BIP, BIP2 | BIP2; ATP binding

Coordinates

chrA03:-:7245705..7248415

Molecular Weight (calculated)

73678.4 Da

IEP (calculated)

4.839

GRAVY (calculated)

-0.480

Length

669 amino acids

Sequence
(BLAST)

001: MARSFGANGT VVLAIIFFGC LFAFSTAKEE ATKLGTVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDNER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFA DKEVQKDRKL VPYQIVDKDG KPYIQVKIKD GETKVFSPEE VSAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNIRVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRIMD YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GLDFSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGNF DLTGIPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKERIDAR NSLETYVYNM KNQINDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GGAGGEGATE EEDESHDEL

Best Arabidopsis Sequence Match ( AT5G28540.1 )
(BLAST)

001: MARSFGANST VVLAIIFFGC LFALSSAIEE ATKLGSVIGI DLGTTYSCVG VYKNGHVEII ANDQGNRITP SWVGFTDSER LIGEAAKNQA AVNPERTVFD
101: VKRLIGRKFE DKEVQKDRKL VPYQIVNKDG KPYIQVKIKD GETKVFSPEE ISAMILTKMK ETAEAYLGKK IKDAVVTVPA YFNDAQRQAT KDAGVIAGLN
201: VARIINEPTA AAIAYGLDKK GGEKNILVFD LGGGTFDVSV LTIDNGVFEV LSTNGDTHLG GEDFDHRVME YFIKLIKKKH QKDISKDNKA LGKLRRECER
301: AKRALSSQHQ VRVEIESLFD GVDFSEPLTR ARFEELNNDL FRKTMGPVKK AMDDAGLQKS QIDEIVLVGG STRIPKVQQL LKDFFEGKEP NKGVNPDEAV
401: AYGAAVQGGI LSGEGGDETK DILLLDVAPL TLGIETVGGV MTKLIPRNTV IPTKKSQVFT TYQDQQTTVS IQVFEGERSL TKDCRLLGKF DLNGIPPAPR
501: GTPQIEVTFE VDANGILNVK AEDKASGKSE KITITNEKGR LSQEEIDRMV KEAEEFAEED KKVKEKIDAR NALETYVYNM KNQVNDKDKL ADKLEGDEKE
601: KIEAATKEAL EWLDENQNSE KEEYDEKLKE VEAVCNPIIT AVYQRSGGAP GGAGGESSTE EEDESHDEL

Arabidopsis Description

MED37AMediator of RNA polymerase II transcription subunit 37a [Source:UniProtKB/Swiss-Prot;Acc:Q9LKR3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.