Factsheet for Bra009584.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035909.1-P	Field mustard	cytosol	89.69	86.71
Bra024699.1-P	Field mustard	cytosol	83.91	79.45
Bra009583.1-P	Field mustard	cytosol	85.71	78.74
Bra013046.1-P	Field mustard	cytosol	77.03	78.02
Bra035470.1-P	Field mustard	cytosol	83.91	77.85
Bra001457.1-P	Field mustard	cytosol	80.11	75.34
Bra038734.1-P	Field mustard	cytosol	87.16	74.15
Bra018725.1-P	Field mustard	cytosol	44.12	70.72
Bra026084.1-P	Field mustard	cytosol	76.31	65.22
Bra016644.1-P	Field mustard	cytosol	75.95	64.62
TraesCS6D01G402500.1	Wheat	cytosol	53.89	57.53
Zm00001d048687_P002	Maize	cytosol, extracellular, plasma membrane	53.35	57.28
Bra028521.1-P	Field mustard	endoplasmic reticulum	58.95	49.02
Bra015047.1-P	Field mustard	endoplasmic reticulum	58.95	48.95
Bra022819.1-P	Field mustard	endoplasmic reticulum	58.59	48.43
Bra023110.1-P	Field mustard	endoplasmic reticulum	53.89	46.42
Bra031657.1-P	Field mustard	endoplasmic reticulum	54.97	45.17
Bra002461.1-P	Field mustard	cytosol	38.16	39.74
Bra028628.1-P	Field mustard	mitochondrion	43.58	35.44
Bra006027.1-P	Field mustard	mitochondrion	43.4	35.24
Bra010620.1-P	Field mustard	mitochondrion	42.68	34.91
Bra011794.1-P	Field mustard	mitochondrion	42.5	34.46
Bra013786.1-P	Field mustard	plastid	43.94	34.18
Bra010498.1-P	Field mustard	plastid	44.3	34.17
Bra019231.1-P	Field mustard	plastid	43.58	33.94

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1
EnsemblPlantsGene:Bra009584	EnsemblPlants:Bra009584.1	EnsemblPlants:Bra009584.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0002020
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0005829	GO:GO:0005840	GO:GO:0005886
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0009408	GO:GO:0009409	GO:GO:0009506
GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009607	GO:GO:0009615	GO:GO:0009628
GO:GO:0009791	GO:GO:0009987	GO:GO:0010187	GO:GO:0016020	GO:GO:0022626	GO:GO:0030312
GO:GO:0042742	GO:GO:0046686	GO:GO:0048046	GO:GO:0050832	GO:GO:0090332	GO:GO:0098542
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
UniProt:M4CZD7	PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF323	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI0002547D11	SEG:seg

Description

AT5G02500 (E=5e-166) HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding

Coordinates

chrA10:+:17315844..17317907

Molecular Weight (calculated)

61028.6 Da

IEP (calculated)

4.801

GRAVY (calculated)

-0.470

Length

553 amino acids

Sequence
(BLAST)

001: MSGKGEGPAI GIDLGTTTTP SYLAFADSER LIGDAAKNQV AMNPINTVFE VDRSSFQRQL CTERYEVVAI QDHRTPGPAE KPMIVVNYKG EEKQFAAEEI
101: SSMVLIKMRE IAEAYLGVTI KNAVVTVPAY FNDSQRQATK DAGVIAGLNV MRIINEPTAA AIAYGLDKKA TSVGEKNVLI FDLGGGTFDV SLLTIEEGIF
201: EVKATAGDTH LGGEDFDNRM VNHFVQEFKR KSKKDITGNP RALRRLRTAC ERAKRTLSST AQTTIEIDSL FEGIDFYSAL TRARFEELNM DLFRKCMEPV
301: EKCLRDAKMD KSTVHDVVLV GGSTRIPKVQ QLLQDFFNGK ELCKSINPDG VLIQVFEGER ARTKDNNLLG KFELSGIPPA PRGVPQITVC FDIDANGILN
401: VSAEDKTTGQ KNKITITNDK GRLSKDDIEK MVQEAEKYKS EDEEHKKKVE AKNALENYAY NMRNTIQDEK IGEKLPAADK KKIEESIEQA IQWLENNQLG
501: EADEFEDKMK ELESICNPII AKMYQGAGGE AAGMDDDAPP ASGGAGPKIE EVD

Best Arabidopsis Sequence Match ( AT5G02500.2 )
(BLAST)

001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDSSVQSDM KLWPFKIQAG
101: PADKPMIYVE YKGEEKEFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIT GNPRALRRLR TSCERAKRTL SSTAQTTIEI DSLYEGIDFY
301: STITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQGAILSGEG NEKMVQEAEK
401: YKSEDEEHKK KVEAKNALEN YAYNMRNTIQ DEKIGEKLPA ADKKKIEDSI EQAIQWLEGN QLAEADEFED KMKELESICN PIIAKMYQGA GGEAGGPGAS
501: GMDDDAPPAS GGAGPKIEEV D

Arabidopsis Description

MED37EProbable mediator of RNA polymerase II transcription subunit 37e [Source:UniProtKB/Swiss-Prot;Acc:P22953]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.