Factsheet for Bra031657.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
endoplasmic reticulum 5
extracellular 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007687.1-P
Bra014400.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G09080.1	Bra007687.1-P	AT3G62600.1	19763086
AT1G09080.1	Bra014400.1-P	AT3G62600.1	19763086

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06347	Canola	endoplasmic reticulum	94.95	99.53
AT1G09080.1	Thale cress	endoplasmic reticulum	89.45	89.19
VIT_14s0060g02340.t01	Wine grape	endoplasmic reticulum	77.71	80.59
Bra028521.1-P	Field mustard	endoplasmic reticulum	76.08	76.99
PGSC0003DMT400063543	Potato	endoplasmic reticulum	75.63	76.08
Bra015047.1-P	Field mustard	endoplasmic reticulum	75.19	75.98
Bra022819.1-P	Field mustard	endoplasmic reticulum	75.48	75.93
Solyc01g099660.2.1	Tomato	extracellular	75.48	75.93
Bra023110.1-P	Field mustard	endoplasmic reticulum	71.32	74.77
Os03t0710500-00	Rice	extracellular, plasma membrane	70.43	70.85
EER93587	Sorghum	endoplasmic reticulum	70.58	70.27
Bra013046.1-P	Field mustard	cytosol	49.33	60.81
Bra024699.1-P	Field mustard	cytosol	52.6	60.62
Bra001457.1-P	Field mustard	cytosol	52.6	60.2
Bra038734.1-P	Field mustard	cytosol	57.95	60.0
Bra026084.1-P	Field mustard	cytosol	57.65	59.97
Bra009583.1-P	Field mustard	cytosol	53.64	59.97
Bra035470.1-P	Field mustard	cytosol	52.75	59.56
Bra016644.1-P	Field mustard	cytosol	56.61	58.62
Bra035909.1-P	Field mustard	cytosol	49.63	58.39
Bra018725.1-P	Field mustard	cytosol	28.53	55.65
Bra009584.1-P	Field mustard	cytosol	45.17	54.97
Bra002461.1-P	Field mustard	cytosol	37.15	47.08
Bra028628.1-P	Field mustard	mitochondrion	45.91	45.44
Bra006027.1-P	Field mustard	mitochondrion	45.91	45.37
Bra011794.1-P	Field mustard	mitochondrion	45.47	44.87
Bra010620.1-P	Field mustard	mitochondrion	44.58	44.38
Bra013786.1-P	Field mustard	plastid	45.32	42.9
Bra019231.1-P	Field mustard	plastid	44.73	42.39
Bra010498.1-P	Field mustard	plastid	44.58	41.84

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	EnsemblPlantsGene:Bra031657
EnsemblPlants:Bra031657.1	EnsemblPlants:Bra031657.1-P	ncoils:Coil	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005654	GO:GO:0008150	GO:GO:0009653	GO:GO:0009856	GO:GO:0009860	GO:GO:0009987
GO:GO:0016043	GO:GO:0016049	GO:GO:0016592	GO:GO:0030154	GO:GO:0040007	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	UniProt:M4ES79
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF215	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI0002543295	SEG:seg

Description

AT1G09080 (E=0.0) BIP3 | BIP3; ATP binding

Coordinates

chrA09:+:35362629..35365327

Molecular Weight (calculated)

75078.5 Da

IEP (calculated)

4.647

GRAVY (calculated)

-0.415

Length

673 amino acids

Sequence
(BLAST)

001: MCLDGLIGSN TQLFFNWLIF DEYMCLWRLM FMNRAVFMSS VAIEGEEEKL GTVIGIDLGT TYSCVGVYHN NHVEIIANDQ GNRITPSWVA FTDTERLIGE
101: AAKNQAAKNP EGTIFDPKRL MGRKFDDPDV QRDIKFLPYK VVNKDGKPYI QVKVKGEVKV FSPEEISAMI LSKMKETAEA FLGKKIKDAV ITVPAYFNDA
201: QRQATKDAGA IAGLNVVRII NEPTGAAIAY GLDKKGGETN ILVYDLGGGT FDVSILTIDN GVFEVLSTSG DTHLGGEDFD HRVMDYFIKL IKKKYNKDIS
301: KDHKALGKLR RECERAKRAL SNQHQVRVEI ESLFDGADFS EPLTKARFEE LNMDLFKKTM EPVKKALKDA GLKKSEIDEI VLVGGSTRIP KVQEMLKDFF
401: DGKEPNKGTN PDEAVAYGAA VQGGVLSGEG GEETQNILLL DVAPLSLGIE TVGGVMTKVI PRNTAIPTKK SQVFTTYQDQ QTTVSIKVYE GERSMTKDNR
501: ELGKFDLTGI LPAPRGVAQI EVTFEVDANG ILQVKAEDKV AKTSQSITIT NDKGRLTQEE IDEMIREAEE FAEEDRIVKE KIDAKNKLET YVYNMKSSLE
601: KLAEKISYED KAKMEVVLKE ALEWLEENVN AEKDDYEEKL KEVESVCNPV IKSVYEKTSG ESEEDEEVGD DEL

Best Arabidopsis Sequence Match ( AT1G09080.1 )
(BLAST)

001: MIFIKENTAK MTRNKAIACL VFLTVLDFLM NIGAALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL

Arabidopsis Description

MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.