Factsheet for Bra007687.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
endoplasmic reticulum 5
extracellular 4
vacuole 4
plasma membrane 4
golgi 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi, mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007687.1-P
Bra007818.1-P
Bra014400.1-P
Bra015047.1-P
Bra022819.1-P
Bra023110.1-P
Bra028521.1-P
Bra031657.1-P
Bra032038.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62600.1	Bra031657.1-P	AT1G09080.1	19763086
AT3G62600.1	Bra007818.1-P	AT2G25110.1	19763086
AT3G62600.1	Bra032038.1-P	AT2G25110.1	19763086
AT3G62600.1	Bra007687.1-P	AT3G62600.1	19763086
AT3G62600.1	Bra014400.1-P	AT3G62600.1	19763086
AT3G62600.1	Bra015047.1-P	AT5G28540.1	19763086
AT3G62600.1	Bra022819.1-P	AT5G28540.1	19763086
AT3G62600.1	Bra023110.1-P	AT5G28540.1	19763086
AT3G62600.1	Bra028521.1-P	AT5G28540.1	19763086

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11430	Canola	golgi	100.0	100.0
CDX76646	Canola	golgi	99.42	99.42
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	95.09	95.09
Bra003501.1-P	Field mustard	nucleus	87.57	81.67
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	80.35	80.58
Solyc01g079610.2.1	Tomato	nucleus	79.77	80.0
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	79.77	80.0
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	75.14	75.58
TraesCS1B01G125100.1	Wheat	nucleus	75.43	74.57
TraesCS1D01G107200.1	Wheat	nucleus	75.14	74.29
TraesCS1A01G099300.1	Wheat	nucleus	74.57	73.71
EES17752	Sorghum	endoplasmic reticulum, golgi	74.57	73.71
Zm00001d009783_P004	Maize	mitochondrion	72.54	71.71
Os05t0156500-01	Rice	cytosol, nucleus	30.06	71.23
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	75.43	69.97
Zm00001d037586_P001	Maize	endoplasmic reticulum	73.12	68.94
KRH55068	Soybean	cytosol	26.3	66.42
KXG32445	Sorghum	endoplasmic reticulum	64.16	64.16
HORVU1Hr1G022990.1	Barley	cytosol	73.41	59.76
Zm00001d009210_P001	Maize	endoplasmic reticulum	58.38	49.75
Bra014400.1-P	Field mustard	golgi	90.75	47.01
Bra029729.1-P	Field mustard	nucleus	34.39	36.28
Bra009848.1-P	Field mustard	cytosol	32.37	35.44
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	34.1	35.33
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	33.24	35.28
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	32.37	34.89
Bra020505.1-P	Field mustard	cytosol	32.95	34.23
Bra031127.1-P	Field mustard	cytosol	32.66	33.43
Bra011031.1-P	Field mustard	cytosol	33.53	32.95
Bra018443.1-P	Field mustard	nucleus	33.24	32.95
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	32.37	32.94
Bra033783.1-P	Field mustard	cytosol	30.06	32.0
Bra018099.1-P	Field mustard	cytosol	30.06	31.14
Bra002385.1-P	Field mustard	nucleus	37.57	30.81
Bra002386.1-P	Field mustard	nucleus	37.28	30.57
Bra020169.1-P	Field mustard	nucleus	37.28	30.5
Bra006608.1-P	Field mustard	nucleus	35.55	30.15
Bra019519.1-P	Field mustard	cytosol	28.9	30.12
Bra010365.1-P	Field mustard	mitochondrion	25.14	22.42
Bra020721.1-P	Field mustard	mitochondrion	28.32	21.92
Bra030245.1-P	Field mustard	plastid	28.03	21.46
Bra037514.1-P	Field mustard	mitochondrion	27.17	20.8
Bra036942.1-P	Field mustard	nucleus	20.81	20.63
Bra035201.1-P	Field mustard	plastid	29.77	20.56
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	20.81	19.89
Bra010892.1-P	Field mustard	mitochondrion	24.28	19.53
Bra011820.1-P	Field mustard	cytosol	27.75	18.15
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	23.7	17.9
Bra018413.1-P	Field mustard	nucleus	19.94	17.16
Bra019886.1-P	Field mustard	nucleus	20.23	16.17

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.1.2.1.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra007687	EnsemblPlants:Bra007687.1	EnsemblPlants:Bra007687.1-P
ncoils:Coil	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4CTZ3	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR43888	PANTHER:PTHR43888:SF14	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002542B27	SEG:seg

Description

AT3G62600 (E=2e-172) ATERDJ3B | ATERDJ3B; heat shock protein binding / unfolded protein binding

Coordinates

chrA09:-:30397430..30399621

Molecular Weight (calculated)

39129.7 Da

IEP (calculated)

6.333

GRAVY (calculated)

-0.624

Length

346 amino acids

Sequence
(BLAST)

001: MAIRRSNLCI VLFALSYAIC VFAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREVYNRY GEEGLKQHAA
101: NGGRGGGGGM NMQDIFSQFF GGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RNCNCRDEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKFEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIKTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDEHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGS LFVTFEVLFP SSLTEDQKKK IKEVLA

Best Arabidopsis Sequence Match ( AT3G62600.1 )
(BLAST)

001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA

Arabidopsis Description

ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.