Factsheet for Bra018413.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20977	Canola	nucleus	98.01	97.77
AT1G11040.1	Thale cress	cytosol, nucleus, plastid	84.83	77.85
Bra019886.1-P	Field mustard	nucleus	82.84	76.91
Os05t0427900-01	Rice	cytosol	16.92	43.04
GSMUA_Achr7P03030_001	Banana	cytosol	31.59	39.94
KRH64663	Soybean	plastid	34.08	38.7
Solyc06g060240.1.1	Tomato	cytosol	35.57	37.24
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	34.83	36.36
GSMUA_Achr8P32540_001	Banana	mitochondrion	24.63	35.61
HORVU3Hr1G081940.1	Barley	cytosol	28.61	35.49
Os01t0875700-01	Rice	cytosol	28.86	35.47
TraesCS3A01G386400.1	Wheat	cytosol	28.11	35.31
Zm00001d012242_P001	Maize	cytosol	27.61	35.13
TraesCS1B01G278300.1	Wheat	cytosol	28.36	34.86
TraesCS3B01G418500.1	Wheat	cytosol	28.11	34.77
TraesCS1D01G267500.1	Wheat	cytosol	28.61	34.74
EES01846	Sorghum	cytosol	28.36	34.65
TraesCS3D01G379400.1	Wheat	cytosol	27.86	34.46
TraesCS1A01G267600.1	Wheat	cytosol	27.61	33.95
Zm00001d038250_P001	Maize	cytosol	27.11	32.54
Bra018099.1-P	Field mustard	cytosol	26.62	32.04
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	28.61	31.77
Bra029729.1-P	Field mustard	nucleus	25.87	31.71
Bra009848.1-P	Field mustard	cytosol	24.63	31.33
Bra019519.1-P	Field mustard	cytosol	25.87	31.33
Bra036942.1-P	Field mustard	nucleus	27.11	31.23
EES19566	Sorghum	cytosol	26.37	31.18
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	25.62	30.84
Bra033783.1-P	Field mustard	cytosol	24.88	30.77
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	24.88	30.67
Bra020505.1-P	Field mustard	cytosol	24.88	30.03
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	25.37	30.0
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	23.13	28.97
Bra018443.1-P	Field mustard	nucleus	24.88	28.65
Zm00001d042653_P001	Maize	plastid	27.86	28.0
Bra031127.1-P	Field mustard	cytosol	22.89	27.22
Bra011031.1-P	Field mustard	cytosol	22.89	26.14
HORVU0Hr1G000620.4	Barley	plastid	23.63	24.05
Bra010365.1-P	Field mustard	mitochondrion	21.14	21.91
TraesCS6A01G421300.1	Wheat	cytosol	11.19	21.33
Bra007687.1-P	Field mustard	golgi	17.16	19.94
Bra003501.1-P	Field mustard	nucleus	16.92	18.33
HORVU7Hr1G073040.2	Barley	cytosol	10.45	18.1
Bra020169.1-P	Field mustard	nucleus	17.91	17.02
Bra002385.1-P	Field mustard	nucleus	17.66	16.82
Bra002386.1-P	Field mustard	nucleus	17.66	16.82
Bra006608.1-P	Field mustard	nucleus	16.67	16.42
Bra010892.1-P	Field mustard	mitochondrion	14.18	13.26
Bra030245.1-P	Field mustard	plastid	14.18	12.61
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	13.68	12.01
Bra020721.1-P	Field mustard	mitochondrion	12.69	11.41
Bra037514.1-P	Field mustard	mitochondrion	12.69	11.28
Bra035201.1-P	Field mustard	plastid	13.68	10.98
Bra011820.1-P	Field mustard	cytosol	12.94	9.83
Bra014400.1-P	Field mustard	golgi	15.92	9.58

Protein Annotations

EnsemblPlants:Bra018413.1	EnsemblPlants:Bra018413.1-P	EnsemblPlantsGene:Bra018413	Gene3D:2.60.260.20	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:DnaJ_C
InterPro:HSP40/DnaJ_pept-bd	PANTHER:PTHR24078	PANTHER:PTHR24078:SF522	PFAM:PF01556	SEG:seg	SUPFAM:SSF49493
UniParc:UPI0002547E66	UniProt:M4DPH2	MapMan:35.1	:	:	:

Description

AT1G11040 (E=1e-106) | DNAJ chaperone C-terminal domain-containing protein

Coordinates

chrA05:+:8100676..8102485

Molecular Weight (calculated)

44154.4 Da

IEP (calculated)

10.317

GRAVY (calculated)

-0.616

Length

402 amino acids

Sequence
(BLAST)

001: MATPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSDS NADSANHLEE KFAEEDDLIA ARKGLRLQSM DDSSVFKRRS SSLRSNSTSS RRSHTPQARP
101: TYLSSSSSSS NRRSFFSRST SRGHKARPVS NNSSPMASSP SPTGKDQTLA DLFGDVEGLT SPPPPMITKS RSKRDKKNSG SVAFRKSKST RDTAGSMGRS
201: ISRRSSTPIV FSQSTPPKKP PAVEKMLECT LEELCHGGVK NIKITRDVIT DEGLIMKQEE TLRVNIKPGW KKGTKITFEG VGNEKPGYLP EDIIFVVEEK
301: RHSLFKSRGD DLEIAVEIPL LKALTGCNLS VPLLSGESMS ISVGEVIFHG FEKAIKGQGL PNGKEDGRRG DLIITFLVSF PRELSEEHRS MAYEVLKDCS
401: WA

Best Arabidopsis Sequence Match ( AT1G11040.1 )
(BLAST)

001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA

Arabidopsis Description

DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.