Factsheet for Bra037514.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86330	Canola	mitochondrion	98.89	98.03
CDY54516	Canola	mitochondrion	96.68	96.47
Bra020721.1-P	Field mustard	mitochondrion	86.28	87.25
AT5G48030.1	Thale cress	mitochondrion	85.18	84.43
VIT_13s0064g01360.t01	Wine grape	mitochondrion	61.95	62.08
PGSC0003DMT400064990	Potato	mitochondrion	60.4	61.63
Solyc01g086740.2.1	Tomato	mitochondrion	60.4	61.63
KRH27511	Soybean	mitochondrion	58.63	59.82
TraesCS7D01G045900.2	Wheat	mitochondrion	52.43	59.4
KRH36456	Soybean	mitochondrion	58.19	59.37
Zm00001d035975_P001	Maize	mitochondrion	55.75	58.74
GSMUA_Achr4P11580_001	Banana	mitochondrion	58.63	58.63
Zm00001d035974_P001	Maize	mitochondrion	55.31	58.28
EER89093	Sorghum	mitochondrion, plastid	55.75	57.93
KRH13903	Soybean	mitochondrion	56.86	57.88
KRH43470	Soybean	mitochondrion	56.64	57.66
GSMUA_Achr3P00410_001	Banana	mitochondrion	56.86	57.11
TraesCS7A01G051000.1	Wheat	mitochondrion	55.31	56.95
Os06t0116800-01	Rice	mitochondrion	53.76	54.98
HORVU7Hr1G009230.8	Barley	plastid	53.76	54.61
EES15725	Sorghum	mitochondrion, plastid	48.89	52.74
Os12t0168400-01	Rice	plastid	47.79	51.55
Zm00001d023537_P002	Maize	mitochondrion	48.01	51.06
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	46.68	50.12
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	46.46	49.88
TraesCS5A01G117600.1	Wheat	plastid	46.46	49.88
HORVU5Hr1G036400.3	Barley	plastid	46.9	49.65
GSMUA_Achr4P12400_001	Banana	mitochondrion	50.22	48.5
Bra010892.1-P	Field mustard	mitochondrion	31.86	33.49
Bra030245.1-P	Field mustard	plastid	31.19	31.19
Bra009848.1-P	Field mustard	cytosol	19.47	27.85
Bra029729.1-P	Field mustard	nucleus	20.13	27.74
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	19.47	27.41
Bra007687.1-P	Field mustard	golgi	20.8	27.17
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	19.47	26.99
Bra035201.1-P	Field mustard	plastid	29.87	26.95
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	19.91	26.95
Bra033783.1-P	Field mustard	cytosol	18.81	26.15
Bra031127.1-P	Field mustard	cytosol	19.47	26.04
Bra006608.1-P	Field mustard	nucleus	23.45	25.98
Bra011820.1-P	Field mustard	cytosol	30.31	25.9
Bra020505.1-P	Field mustard	cytosol	19.03	25.83
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	26.11	25.76
Bra002385.1-P	Field mustard	nucleus	23.89	25.59
Bra018099.1-P	Field mustard	cytosol	18.81	25.45
Bra002386.1-P	Field mustard	nucleus	23.67	25.36
Bra018443.1-P	Field mustard	nucleus	19.47	25.21
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	18.81	25.0
Bra020169.1-P	Field mustard	nucleus	23.23	24.82
Bra011031.1-P	Field mustard	cytosol	19.25	24.72
Bra019519.1-P	Field mustard	cytosol	18.14	24.7
Bra003501.1-P	Field mustard	nucleus	19.91	24.26
Bra010365.1-P	Field mustard	mitochondrion	14.6	17.01
Bra036942.1-P	Field mustard	nucleus	11.28	14.61
Bra014400.1-P	Field mustard	golgi	21.46	14.52
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	11.5	14.36
Bra018413.1-P	Field mustard	nucleus	11.28	12.69
Bra019886.1-P	Field mustard	nucleus	11.73	12.24

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra037514	EnsemblPlants:Bra037514.1
EnsemblPlants:Bra037514.1-P	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4F8V2	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI000253F8B5
SEG:seg	:	:	:	:	:

Description

AT5G48030 (E=3e-202) GFA2 | GFA2 (GAMETOPHYTIC FACTOR 2); heat shock protein binding / unfolded protein binding

Coordinates

chrA06:-:21107260..21110432

Molecular Weight (calculated)

49263.2 Da

IEP (calculated)

9.552

GRAVY (calculated)

-0.605

Length

452 amino acids

Sequence
(BLAST)

001: MLPNAKVIRL LARRCLSSSR AQDFAYQKLR GVAVGSCRRL NTGSGNPAKV LGDHASKSGH DRRWISFGGF NSNFGSRRSI HGTGSSSMSS KDYYELLGVN
101: KNATDGEIKK AYYGLAKKLH PDMNKDDPEA EKKFQEVSKA YEILKDKEKR DLYDQVGHEA FEQNASGGFP NDGGGGFGQG FDPFDNPFDI FGQIFNRNKQ
201: AFGGQDVKVL LELSFMEAVQ GCSKTVTFQT DMACNTCGGQ GVPPGTKRER CKACDGSGMT TMRRGILSIQ RTCQQCGGAG QTFSSICKSC RGARVVPGQK
301: SVKVNIDPGV DNSDTIKVGR AGGADPEGDQ PGDLYVIFKV REDPVFRREG SDIHVNSVLS VTQAILGGTI QVPTLTGDVV VKVRPGTQPG QKVVLRNKGI
401: RARKSTRFGD QYVHFNVSIP ANITQRQREL LEEFVKEEQG EYEKRTASGS SQ

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.